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The Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel.
Fitzgerald T, Brettell I, Leger A, Wolf N, Kusminski N, Monahan J, Barton C, Herder C, Aadepu N, Gierten J, Becker C, Hammouda OT, Hasel E, Lischik C, Lust K, Sokolova N, Suzuki R, Tsingos E, Tavhelidse T, Thumberger T, Watson P, Welz B, Khouja N, Naruse K, Birney E, Wittbrodt J, Loosli F. Fitzgerald T, et al. Among authors: aadepu n. Genome Biol. 2022 Feb 21;23(1):59. doi: 10.1186/s13059-022-02623-z. Genome Biol. 2022. PMID: 35189950 Free PMC article.
Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel.
Leger A, Brettell I, Monahan J, Barton C, Wolf N, Kusminski N, Herder C, Aadepu N, Becker C, Gierten J, Hammouda OT, Hasel E, Lischik C, Lust K, Sokolova N, Suzuki R, Tavhelidse T, Thumberger T, Tsingos E, Watson P, Welz B, Naruse K, Loosli F, Wittbrodt J, Birney E, Fitzgerald T. Leger A, et al. Among authors: aadepu n. Genome Biol. 2022 Feb 21;23(1):58. doi: 10.1186/s13059-022-02602-4. Genome Biol. 2022. PMID: 35189951 Free PMC article.
Conserved and diverged asymmetric gene expression in the brain of teleosts.
Agostini C, Bühler A, Antico Calderone A, Aadepu N, Herder C, Loosli F, Carl M. Agostini C, et al. Among authors: aadepu n. Front Cell Dev Biol. 2022 Sep 21;10:1005776. doi: 10.3389/fcell.2022.1005776. eCollection 2022. Front Cell Dev Biol. 2022. PMID: 36211473 Free PMC article.
Introducing Biomedisa as an open-source online platform for biomedical image segmentation.
Lösel PD, van de Kamp T, Jayme A, Ershov A, Faragó T, Pichler O, Tan Jerome N, Aadepu N, Bremer S, Chilingaryan SA, Heethoff M, Kopmann A, Odar J, Schmelzle S, Zuber M, Wittbrodt J, Baumbach T, Heuveline V. Lösel PD, et al. Among authors: aadepu n. Nat Commun. 2020 Nov 4;11(1):5577. doi: 10.1038/s41467-020-19303-w. Nat Commun. 2020. PMID: 33149150 Free PMC article.