AnnoSpat annotates cell types and quantifies cellular arrangements from spatial proteomics.
Mongia A, Zohora FT, Burget NG, Zhou Y, Saunders DC, Wang YJ, Brissova M, Powers AC, Kaestner KH, Vahedi G, Naji A, Schwartz GW, Faryabi RB.
Mongia A, et al.
Nat Commun. 2024 May 3;15(1):3744. doi: 10.1038/s41467-024-47334-0.
Nat Commun. 2024.
PMID: 38702321
Free PMC article.
However, annotation of cell types and quantification of their relative localization in tissues remain challenging. To address these unmet needs for atlas-scale datasets like Human Pancreas Analysis Program (HPAP), we develop AnnoSpat (Annotator and Spatial Pattern Finder) …
However, annotation of cell types and quantification of their relative localization in tissues remain challenging. To address these unmet ne …