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Mining Amphibian and Insect Transcriptomes for Antimicrobial Peptide Sequences with rAMPage.
Antibiotics (Basel). 2022 Jul 15;11(7):952. doi: 10.3390/antibiotics11070952.
Antibiotics (Basel). 2022.
PMID: 35884206
Free PMC article.
RResolver: efficient short-read repeat resolution within ABySS.
Nikolić V, Afshinfard A, Chu J, Wong J, Coombe L, Nip KM, Warren RL, Birol I.
Nikolić V, et al.
BMC Bioinformatics. 2022 Jun 21;23(1):246. doi: 10.1186/s12859-022-04790-z.
BMC Bioinformatics. 2022.
PMID: 35729491
Free PMC article.
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ntEdit+Sealer: Efficient Targeted Error Resolution and Automated Finishing of Long-Read Genome Assemblies.
Li JX, Coombe L, Wong J, Birol I, Warren RL.
Li JX, et al.
Curr Protoc. 2022 May;2(5):e442. doi: 10.1002/cpz1.442.
Curr Protoc. 2022.
PMID: 35567771
Free PMC article.
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LongStitch: high-quality genome assembly correction and scaffolding using long reads.
Coombe L, Li JX, Lo T, Wong J, Nikolic V, Warren RL, Birol I.
Coombe L, et al.
BMC Bioinformatics. 2021 Oct 30;22(1):534. doi: 10.1186/s12859-021-04451-7.
BMC Bioinformatics. 2021.
PMID: 34717540
Free PMC article.
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HLA predictions from the bronchoalveolar lavage fluid and blood samples of eight COVID-19 patients at the pandemic onset.
Warren RL, Birol I.
Warren RL, et al.
Bioinformatics. 2021 Jan 29;36(21):5271-5273. doi: 10.1093/bioinformatics/btaa756.
Bioinformatics. 2021.
PMID: 32853340
Free PMC article.
No abstract available.
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