UM1 HG009409/HG/NHGRI NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2017	2
2019	7
2020	6
2021	2
2022	2
2023	1
2024	1

1

Oncogenic extrachromosomal DNA functions as mobile enhancers to globally amplify chromosomal transcription.

Zhu Y, Gujar AD, Wong CH, Tjong H, Ngan CY, Gong L, Chen YA, Kim H, Liu J, Li M, Mil-Homens A, Maurya R, Kuhlberg C, Sun F, Yi E, deCarvalho AC, Ruan Y, Verhaak RGW, Wei CL. Zhu Y, et al. Cancer Cell. 2021 May 10;39(5):694-707.e7. doi: 10.1016/j.ccell.2021.03.006. Epub 2021 Apr 8. Cancer Cell. 2021. PMID: 33836152 Free PMC article.

2

Methods for comparative ChIA-PET and Hi-C data analysis.

Capurso D, Tang Z, Ruan Y. Capurso D, et al. Methods. 2020 Jan 1;170:69-74. doi: 10.1016/j.ymeth.2019.09.019. Epub 2019 Oct 16. Methods. 2020. PMID: 31629084 Free article. Review.

3

Guilt by association: EcDNA as a mobile transactivator in cancer.

Zhu Y, Gong L, Wei CL. Zhu Y, et al. Trends Cancer. 2022 Sep;8(9):747-758. doi: 10.1016/j.trecan.2022.04.011. Epub 2022 Jun 23. Trends Cancer. 2022. PMID: 35753910 Free PMC article. Review.

4

Multiplex chromatin interactions with single-molecule precision.

Zheng M, Tian SZ, Capurso D, Kim M, Maurya R, Lee B, Piecuch E, Gong L, Zhu JJ, Li Z, Wong CH, Ngan CY, Wang P, Ruan X, Wei CL, Ruan Y. Zheng M, et al. Nature. 2019 Feb;566(7745):558-562. doi: 10.1038/s41586-019-0949-1. Epub 2019 Feb 18. Nature. 2019. PMID: 30778195 Free PMC article.

5

Epigenetic activation of the FLT3 gene by ZNF384 fusion confers a therapeutic susceptibility in acute lymphoblastic leukemia.

Zhao X, Wang P, Diedrich JD, Smart B, Reyes N, Yoshimura S, Zhang J, Yang W, Barnett K, Xu B, Li Z, Huang X, Yu J, Crews K, Yeoh AEJ, Konopleva M, Wei CL, Pui CH, Savic D, Yang JJ. Zhao X, et al. Nat Commun. 2022 Sep 14;13(1):5401. doi: 10.1038/s41467-022-33143-w. Nat Commun. 2022. PMID: 36104354 Free PMC article.

6

ChIATAC is an efficient strategy for multi-omics mapping of 3D epigenomes from low-cell inputs.

Chai H, Tjong H, Li P, Liao W, Wang P, Wong CH, Ngan CY, Leonard WJ, Wei CL, Ruan Y. Chai H, et al. Nat Commun. 2023 Jan 13;14(1):213. doi: 10.1038/s41467-023-35879-5. Nat Commun. 2023. PMID: 36639381 Free PMC article.

7

In situ Chromatin Interaction Analysis Using Paired-End Tag Sequencing.

Wang P, Feng Y, Zhu K, Chai H, Chang YT, Yang X, Liu X, Shen C, Gega E, Lee B, Kim M, Ruan X, Ruan Y. Wang P, et al. Curr Protoc. 2021 Aug;1(8):e174. doi: 10.1002/cpz1.174. Curr Protoc. 2021. PMID: 34351700 Free PMC article.

8

A Unique Epigenomic Landscape Defines Human Erythropoiesis.

Schulz VP, Yan H, Lezon-Geyda K, An X, Hale J, Hillyer CD, Mohandas N, Gallagher PG. Schulz VP, et al. Cell Rep. 2019 Sep 10;28(11):2996-3009.e7. doi: 10.1016/j.celrep.2019.08.020. Cell Rep. 2019. PMID: 31509757 Free PMC article.

9

Chromatin interaction analyses elucidate the roles of PRC2-bound silencers in mouse development.

Ngan CY, Wong CH, Tjong H, Wang W, Goldfeder RL, Choi C, He H, Gong L, Lin J, Urban B, Chow J, Li M, Lim J, Philip V, Murray SA, Wang H, Wei CL. Ngan CY, et al. Nat Genet. 2020 Mar;52(3):264-272. doi: 10.1038/s41588-020-0581-x. Epub 2020 Feb 24. Nat Genet. 2020. PMID: 32094912 Free PMC article.

10

Multifaceted roles of cohesin in regulating transcriptional loops.

Kim M, Wang P, Clow PA, Chien IE, Wang X, Peng J, Chai H, Liu X, Lee B, Ngan CY, Yue F, Milenkovic O, Chuang JH, Wei CL, Casellas R, Cheng AW, Ruan Y. Kim M, et al. bioRxiv [Preprint]. 2024 Mar 27:2024.03.25.586715. doi: 10.1101/2024.03.25.586715. bioRxiv. 2024. PMID: 38585764 Free PMC article. Preprint.

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