R01 GM103725/GM/NIGMS NIH HHS/United States[Grants and Funding] - Search Results

Year	Number of Results
2009	1
2010	3
2011	2
2012	1
2013	2
2014	2
2015	5
2016	11
2017	2
2018	3
2019	1
2020	1
2024	0

1

Computational Methods in Mass Spectrometry-Based Proteomics.

Li S, Tang H. Li S, et al. Adv Exp Med Biol. 2016;939:63-89. doi: 10.1007/978-981-10-1503-8_4. Adv Exp Med Biol. 2016. PMID: 27807744 Review.

2

Unusual fragmentation of derivatized cysteine-containing peptides.

Degraan-Weber N, Zhao B, Reilly JP. Degraan-Weber N, et al. Rapid Commun Mass Spectrom. 2018 Sep 15;32(17):1491-1496. doi: 10.1002/rcm.8196. Rapid Commun Mass Spectrom. 2018. PMID: 29874404 Free PMC article.

3

Computational identification of micro-structural variations and their proteogenomic consequences in cancer.

Lin YY, Gawronski A, Hach F, Li S, Numanagic I, Sarrafi I, Mishra S, McPherson A, Collins CC, Radovich M, Tang H, Sahinalp SC. Lin YY, et al. Bioinformatics. 2018 May 15;34(10):1672-1681. doi: 10.1093/bioinformatics/btx807. Bioinformatics. 2018. PMID: 29267878 Free PMC article.

4

Distinguishing Aspartic and Isoaspartic Acids in Peptides by Several Mass Spectrometric Fragmentation Methods.

DeGraan-Weber N, Zhang J, Reilly JP. DeGraan-Weber N, et al. J Am Soc Mass Spectrom. 2016 Dec;27(12):2041-2053. doi: 10.1007/s13361-016-1487-9. Epub 2016 Sep 9. J Am Soc Mass Spectrom. 2016. PMID: 27613306 Free PMC article.

5

"Wet" Versus "Dry" Folding of Polyproline.

Shi L, Holliday AE, Bohrer BC, Kim D, Servage KA, Russell DH, Clemmer DE. Shi L, et al. J Am Soc Mass Spectrom. 2016 Jun;27(6):1037-47. doi: 10.1007/s13361-016-1372-6. Epub 2016 Apr 8. J Am Soc Mass Spectrom. 2016. PMID: 27059978 Free PMC article.

6

Impact of Amidination on Peptide Fragmentation and Identification in Shotgun Proteomics.

Li S, Dabir A, Misal SA, Tang H, Radivojac P, Reilly JP. Li S, et al. J Proteome Res. 2016 Oct 7;15(10):3656-3665. doi: 10.1021/acs.jproteome.6b00468. Epub 2016 Sep 27. J Proteome Res. 2016. PMID: 27615690 Free PMC article.

7

Configurationally-Coupled Protonation of Polyproline-7.

Shi L, Holliday AE, Khanal N, Russell DH, Clemmer DE. Shi L, et al. J Am Chem Soc. 2015 Jul 15;137(27):8680-3. doi: 10.1021/jacs.5b04287. Epub 2015 Jul 1. J Am Chem Soc. 2015. PMID: 26115587

8

Penultimate proline in neuropeptides.

Glover MS, Bellinger EP, Radivojac P, Clemmer DE. Glover MS, et al. Anal Chem. 2015 Aug 18;87(16):8466-72. doi: 10.1021/acs.analchem.5b01889. Epub 2015 Jul 29. Anal Chem. 2015. PMID: 26192015

9

New mixture models for decoy-free false discovery rate estimation in mass spectrometry proteomics.

Peng Y, Jain S, Li YF, Greguš M, Ivanov AR, Vitek O, Radivojac P. Peng Y, et al. Bioinformatics. 2020 Dec 30;36(Suppl_2):i745-i753. doi: 10.1093/bioinformatics/btaa807. Bioinformatics. 2020. PMID: 33381824 Free PMC article.

10

Proteomic Evidence for In-Frame and Out-of-Frame Alternatively Spliced Isoforms in Human and Mouse.

Ramalho RF, Li S, Radivojac P, Hahn MW. Ramalho RF, et al. IEEE/ACM Trans Comput Biol Bioinform. 2018 Jul-Aug;15(4):1284-1289. doi: 10.1109/TCBB.2015.2480068. Epub 2015 Sep 18. IEEE/ACM Trans Comput Biol Bioinform. 2018. PMID: 26394435

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