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2022 2
2023 13
2024 7

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22 results

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Page 1
Scalable Bayesian phylogenetics.
Fisher AA, Hassler GW, Ji X, Baele G, Suchard MA, Lemey P. Fisher AA, et al. Philos Trans R Soc Lond B Biol Sci. 2022 Oct 10;377(1861):20210242. doi: 10.1098/rstb.2021.0242. Epub 2022 Aug 22. Philos Trans R Soc Lond B Biol Sci. 2022. PMID: 35989603 Free PMC article. Review.
Accelerated evolution of SARS-CoV-2 in free-ranging white-tailed deer.
McBride DS, Garushyants SK, Franks J, Magee AF, Overend SH, Huey D, Williams AM, Faith SA, Kandeil A, Trifkovic S, Miller L, Jeevan T, Patel A, Nolting JM, Tonkovich MJ, Genders JT, Montoney AJ, Kasnyik K, Linder TJ, Bevins SN, Lenoch JB, Chandler JC, DeLiberto TJ, Koonin EV, Suchard MA, Lemey P, Webby RJ, Nelson MI, Bowman AS. McBride DS, et al. Nat Commun. 2023 Aug 28;14(1):5105. doi: 10.1038/s41467-023-40706-y. Nat Commun. 2023. PMID: 37640694 Free PMC article.
Genomic assessment of invasion dynamics of SARS-CoV-2 Omicron BA.1.
Tsui JL, McCrone JT, Lambert B, Bajaj S, Inward RPD, Bosetti P, Pena RE, Tegally H, Hill V, Zarebski AE, Peacock TP, Liu L, Wu N, Davis M, Bogoch II, Khan K, Kall M, Abdul Aziz NIB, Colquhoun R, O'Toole Á, Jackson B, Dasgupta A, Wilkinson E, de Oliveira T; COVID-19 Genomics UK (COG-UK) consortium¶; Connor TR, Loman NJ, Colizza V, Fraser C, Volz E, Ji X, Gutierrez B, Chand M, Dellicour S, Cauchemez S, Raghwani J, Suchard MA, Lemey P, Rambaut A, Pybus OG, Kraemer MUG. Tsui JL, et al. Science. 2023 Jul 21;381(6655):336-343. doi: 10.1126/science.adg6605. Epub 2023 Jul 20. Science. 2023. PMID: 37471538 Free PMC article.
Dispersal history of SARS-CoV-2 in Galicia, Spain.
Gallego-García P, Estévez-Gómez N, De Chiara L, Alvariño P, Juiz-González PM, Torres-Beceiro I, Poza M, Vallejo JA, Rumbo-Feal S, Conde-Pérez K, Aja-Macaya P, Ladra S, Moreno-Flores A, Gude-González MJ, Coira A, Aguilera A, Costa-Alcalde JJ, Trastoy R, Barbeito-Castiñeiras G, García-Souto D, Tubio JMC, Trigo-Daporta M, Camacho-Zamora P, Costa JG, González-Domínguez M, Canoura-Fernández L, Glez-Peña D, Pérez-Castro S, Cabrera JJ, Daviña-Núñez C, Godoy-Diz M, Treinta-Álvarez AB, Veiga MI, Sousa JC, Osório NS, Comas I, González-Candelas F, Hong SL, Bollen N, Dellicour S, Baele G, Suchard MA, Lemey P, Agulla A, Bou G, Alonso-García P, Pérez-Del-Molino ML, García-Campello M, Paz-Vidal I, Regueiro B, Posada D. Gallego-García P, et al. medRxiv [Preprint]. 2024 Feb 28:2024.02.27.24303385. doi: 10.1101/2024.02.27.24303385. medRxiv. 2024. PMID: 38463998 Free PMC article. Preprint.
Accelerated evolution of SARS-CoV-2 in free-ranging white-tailed deer.
McBride D, Garushyants S, Franks J, Magee A, Overend S, Huey D, Williams A, Faith S, Kandeil A, Trifkovic S, Miller L, Jeevan T, Patel A, Nolting J, Tonkovich M, Genders JT, Montoney A, Kasnyik K, Linder T, Bevins S, Lenoch J, Chandler J, DeLiberto T, Koonin E, Suchard M, Lemey P, Webby R, Nelson M, Bowman A. McBride D, et al. Res Sq [Preprint]. 2023 Feb 16:rs.3.rs-2574993. doi: 10.21203/rs.3.rs-2574993/v1. Res Sq. 2023. PMID: 36824718 Free PMC article. Updated. Preprint.
How fast are viruses spreading in the wild?
Dellicour S, Bastide P, Rocu P, Fargette D, Hardy OJ, Suchard MA, Guindon S, Lemey P. Dellicour S, et al. bioRxiv [Preprint]. 2024 Apr 11:2024.04.10.588821. doi: 10.1101/2024.04.10.588821. bioRxiv. 2024. PMID: 38645268 Free PMC article. Preprint.
The recency and geographical origins of the bat viruses ancestral to SARS-CoV and SARS-CoV-2.
Pekar JE, Lytras S, Ghafari M, Magee AF, Parker E, Havens JL, Katzourakis A, Vasylyeva TI, Suchard MA, Hughes AC, Hughes J, Robertson DL, Dellicour S, Worobey M, Wertheim JO, Lemey P. Pekar JE, et al. bioRxiv [Preprint]. 2023 Jul 12:2023.07.12.548617. doi: 10.1101/2023.07.12.548617. bioRxiv. 2023. PMID: 37502985 Free PMC article. Preprint.
22 results