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2012 4
2013 9
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2024 2

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Page 1
Computational Resources for Molecular Biology 2021.
Casadio R, Lenhard B, Sternberg MJE. Casadio R, et al. J Mol Biol. 2021 May 28;433(11):166962. doi: 10.1016/j.jmb.2021.166962. Epub 2021 Mar 24. J Mol Biol. 2021. PMID: 33774035 No abstract available.
JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles.
Castro-Mondragon JA, Riudavets-Puig R, Rauluseviciute I, Lemma RB, Turchi L, Blanc-Mathieu R, Lucas J, Boddie P, Khan A, Manosalva Pérez N, Fornes O, Leung TY, Aguirre A, Hammal F, Schmelter D, Baranasic D, Ballester B, Sandelin A, Lenhard B, Vandepoele K, Wasserman WW, Parcy F, Mathelier A. Castro-Mondragon JA, et al. Nucleic Acids Res. 2022 Jan 7;50(D1):D165-D173. doi: 10.1093/nar/gkab1113. Nucleic Acids Res. 2022. PMID: 34850907 Free PMC article.
Promoter architectures and developmental gene regulation.
Haberle V, Lenhard B. Haberle V, et al. Semin Cell Dev Biol. 2016 Sep;57:11-23. doi: 10.1016/j.semcdb.2016.01.014. Epub 2016 Jan 16. Semin Cell Dev Biol. 2016. PMID: 26783721 Free article. Review.
Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements.
Baranasic D, Hörtenhuber M, Balwierz PJ, Zehnder T, Mukarram AK, Nepal C, Várnai C, Hadzhiev Y, Jimenez-Gonzalez A, Li N, Wragg J, D'Orazio FM, Relic D, Pachkov M, Díaz N, Hernández-Rodríguez B, Chen Z, Stoiber M, Dong M, Stevens I, Ross SE, Eagle A, Martin R, Obasaju O, Rastegar S, McGarvey AC, Kopp W, Chambers E, Wang D, Kim HR, Acemel RD, Naranjo S, Łapiński M, Chong V, Mathavan S, Peers B, Sauka-Spengler T, Vingron M, Carninci P, Ohler U, Lacadie SA, Burgess SM, Winata C, van Eeden F, Vaquerizas JM, Gómez-Skarmeta JL, Onichtchouk D, Brown BJ, Bogdanovic O, van Nimwegen E, Westerfield M, Wardle FC, Daub CO, Lenhard B, Müller F. Baranasic D, et al. Nat Genet. 2022 Jul;54(7):1037-1050. doi: 10.1038/s41588-022-01089-w. Epub 2022 Jul 4. Nat Genet. 2022. PMID: 35789323 Free PMC article.
Liver RBFOX2 regulates cholesterol homeostasis via Scarb1 alternative splicing in mice.
Paterson HAB, Yu S, Artigas N, Prado MA, Haberman N, Wang YF, Jobbins AM, Pahita E, Mokochinski J, Hall Z, Guerin M, Paulo JA, Ng SS, Villarroya F, Rashid ST, Le Goff W, Lenhard B, Cebola I, Finley D, Gygi SP, Sibley CR, Vernia S. Paterson HAB, et al. Nat Metab. 2022 Dec;4(12):1812-1829. doi: 10.1038/s42255-022-00681-y. Epub 2022 Dec 19. Nat Metab. 2022. PMID: 36536133 Free PMC article.
The mystery of extreme non-coding conservation.
Harmston N, Baresic A, Lenhard B. Harmston N, et al. Philos Trans R Soc Lond B Biol Sci. 2013 Nov 11;368(1632):20130021. doi: 10.1098/rstb.2013.0021. Print 2013 Dec 19. Philos Trans R Soc Lond B Biol Sci. 2013. PMID: 24218634 Free PMC article. Review.
Core promoterome of barley embryo.
Pavlu S, Nikumbh S, Kovacik M, An T, Lenhard B, Simkova H, Navratilova P. Pavlu S, et al. Comput Struct Biotechnol J. 2023 Dec 5;23:264-277. doi: 10.1016/j.csbj.2023.12.003. eCollection 2024 Dec. Comput Struct Biotechnol J. 2023. PMID: 38173877 Free PMC article.
77 results