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Year Number of Results
2021 3
2022 4
2023 5
2024 5

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16 results

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Page 1
Rapid viral metagenomics using SMART-9N amplification and nanopore sequencing.
Claro IM, Ramundo MS, Coletti TM, da Silva CAM, Valenca IN, Candido DS, Sales FCS, Manuli ER, de Jesus JG, de Paula A, Felix AC, Andrade PDS, Pinho MC, Souza WM, Amorim MR, Proenca-Modena JL, Kallas EG, Levi JE, Faria NR, Sabino EC, Loman NJ, Quick J. Claro IM, et al. Wellcome Open Res. 2023 Apr 24;6:241. doi: 10.12688/wellcomeopenres.17170.2. eCollection 2021. Wellcome Open Res. 2023. PMID: 37224315 Free PMC article.
Chikungunya: a decade of burden in the Americas.
de Souza WM, Ribeiro GS, de Lima STS, de Jesus R, Moreira FRR, Whittaker C, Sallum MAM, Carrington CVF, Sabino EC, Kitron U, Faria NR, Weaver SC. de Souza WM, et al. Lancet Reg Health Am. 2024 Jan 8;30:100673. doi: 10.1016/j.lana.2023.100673. eCollection 2024 Feb. Lancet Reg Health Am. 2024. PMID: 38283942 Free PMC article. Review.
Global disparities in SARS-CoV-2 genomic surveillance.
Brito AF, Semenova E, Dudas G, Hassler GW, Kalinich CC, Kraemer MUG, Ho J, Tegally H, Githinji G, Agoti CN, Matkin LE, Whittaker C; Danish Covid-19 Genome Consortium; COVID-19 Impact Project; Network for Genomic Surveillance in South Africa (NGS-SA); GISAID core curation team; Howden BP, Sintchenko V, Zuckerman NS, Mor O, Blankenship HM, de Oliveira T, Lin RTP, Siqueira MM, Resende PC, Vasconcelos ATR, Spilki FR, Aguiar RS, Alexiev I, Ivanov IN, Philipova I, Carrington CVF, Sahadeo NSD, Gurry C, Maurer-Stroh S, Naidoo D, von Eije KJ, Perkins MD, van Kerkhove M, Hill SC, Sabino EC, Pybus OG, Dye C, Bhatt S, Flaxman S, Suchard MA, Grubaugh ND, Baele G, Faria NR. Brito AF, et al. medRxiv [Preprint]. 2021 Dec 9:2021.08.21.21262393. doi: 10.1101/2021.08.21.21262393. medRxiv. 2021. PMID: 34462754 Free PMC article. Updated. Preprint.
Spatiotemporal dynamics and recurrence of chikungunya virus in Brazil: an epidemiological study.
de Souza WM, de Lima STS, Simões Mello LM, Candido DS, Buss L, Whittaker C, Claro IM, Chandradeva N, Granja F, de Jesus R, Lemos PS, Toledo-Teixeira DA, Barbosa PP, Firmino ACL, Amorim MR, Duarte LMF, Pessoa IB Jr, Forato J, Vasconcelos IL, Maximo ACBM, Araújo ELL, Perdigão Mello L, Sabino EC, Proença-Módena JL, Faria NR, Weaver SC. de Souza WM, et al. Lancet Microbe. 2023 May;4(5):e319-e329. doi: 10.1016/S2666-5247(23)00033-2. Epub 2023 Apr 6. Lancet Microbe. 2023. PMID: 37031687 Free PMC article.
Pathophysiology of chikungunya virus infection associated with fatal outcomes.
de Souza WM, Fumagalli MJ, de Lima STS, Parise PL, Carvalho DCM, Hernandez C, de Jesus R, Delafiori J, Candido DS, Carregari VC, Muraro SP, Souza GF, Simões Mello LM, Claro IM, Díaz Y, Kato RB, Trentin LN, Costa CHS, Maximo ACBM, Cavalcante KF, Fiuza TS, Viana VAF, Melo MEL, Ferraz CPM, Silva DB, Duarte LMF, Barbosa PP, Amorim MR, Judice CC, Toledo-Teixeira DA, Ramundo MS, Aguilar PV, Araújo ELL, Costa FTM, Cerqueira-Silva T, Khouri R, Boaventura VS, Figueiredo LTM, Fang R, Moreno B, López-Vergès S, Mello LP, Skaf MS, Catharino RR, Granja F, Martins-de-Souza D, Plante JA, Plante KS, Sabino EC, Diamond MS, Eugenin E, Proença-Módena JL, Faria NR, Weaver SC. de Souza WM, et al. Cell Host Microbe. 2024 Apr 10;32(4):606-622.e8. doi: 10.1016/j.chom.2024.02.011. Epub 2024 Mar 12. Cell Host Microbe. 2024. PMID: 38479396 Free PMC article.
Real-time RT-PCR for Venezuelan equine encephalitis complex, Madariaga, and Eastern equine encephalitis viruses: application in human and mosquito public health surveillance in Panama.
Carrera J-P, Araúz D, Rojas A, Cardozo F, Stittleburg V, Morales Claro I, Galue J, Lezcano-Coba C, Romero Rebello Moreira F, -Rivera LF, Chen-Germán M, Moreno B, Capitan-Barrios Z, López-Vergès S, Pascale JM, Sabino EC, Valderrama A, Hanley KA, Donnelly CA, Vasilakis N, Faria NR, Waggoner JJ. Carrera J-P, et al. J Clin Microbiol. 2023 Dec 19;61(12):e0015223. doi: 10.1128/jcm.00152-23. Epub 2023 Nov 20. J Clin Microbiol. 2023. PMID: 37982611 Free PMC article.
Spatial and temporal fluctuations in COVID-19 fatality rates in Brazilian hospitals.
Brizzi A, Whittaker C, Servo LMS, Hawryluk I, Prete CA Jr, de Souza WM, Aguiar RS, Araujo LJT, Bastos LS, Blenkinsop A, Buss LF, Candido D, Castro MC, Costa SF, Croda J, de Souza Santos AA, Dye C, Flaxman S, Fonseca PLC, Geddes VEV, Gutierrez B, Lemey P, Levin AS, Mellan T, Bonfim DM, Miscouridou X, Mishra S, Monod M, Moreira FRR, Nelson B, Pereira RHM, Ranzani O, Schnekenberg RP, Semenova E, Sonabend R, Souza RP, Xi X, Sabino EC, Faria NR, Bhatt S, Ratmann O. Brizzi A, et al. Nat Med. 2022 Jul;28(7):1476-1485. doi: 10.1038/s41591-022-01807-1. Epub 2022 May 10. Nat Med. 2022. PMID: 35538260 Free PMC article.
Emergence and widespread circulation of a recombinant SARS-CoV-2 lineage in North America.
Gutierrez B, Castelán Sánchez HG, Candido DDS, Jackson B, Fleishon S, Houzet R, Ruis C, Delaye L, Faria NR, Rambaut A, Pybus OG, Escalera-Zamudio M. Gutierrez B, et al. Cell Host Microbe. 2022 Aug 10;30(8):1112-1123.e3. doi: 10.1016/j.chom.2022.06.010. Epub 2022 Jun 20. Cell Host Microbe. 2022. PMID: 35853454 Free PMC article.
Clinical and epidemiological characteristics of Madariaga and Venezuelan equine encephalitis virus infections.
Rivera LF, Lezcano-Coba C, Galué J, Rodriguez X, Juarez Y, de Souza WM, Capitan-Barrios Z, Valderrama A, Abrego L, Cedeño H, Jackman C, Waggoner JJ, Aguilar PV, Guzman H, Weaver SC, Tesh RB, López-Vèrges S, Donnelly CA, Estofolete CF, Nogueira ML, Faria NR, Vasilakis N, Vittor AY, Smith DR, Carrera JP. Rivera LF, et al. medRxiv [Preprint]. 2024 Feb 3:2024.02.02.24302220. doi: 10.1101/2024.02.02.24302220. medRxiv. 2024. PMID: 38352566 Free PMC article. Preprint.
Global Expansion of SARS-CoV-2 Variants of Concern: Dispersal Patterns and Influence of Air Travel.
Tegally H, Wilkinson E, Martin D, Moir M, Brito A, Giovanetti M, Khan K, Huber C, Bogoch II, San JE, Tsui JL, Poongavanan J, Xavier JS, Candido DDS, Romero F, Baxter C, Pybus OG, Lessells R, Faria NR, Kraemer MUG, de Oliveira T. Tegally H, et al. medRxiv [Preprint]. 2022 Nov 27:2022.11.22.22282629. doi: 10.1101/2022.11.22.22282629. medRxiv. 2022. PMID: 36451885 Free PMC article. Updated. Preprint.
16 results