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Year Number of Results
2000 1
2002 1
2003 3
2004 2
2007 1
2009 2
2010 2
2011 1
2013 1
2014 1
2015 2
2016 8
2017 2
2018 2
2019 3
2020 2
2021 5
2022 7
2023 4
2024 1

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48 results

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Targeted suppression of human IBD-associated gut microbiota commensals by phage consortia for treatment of intestinal inflammation.
Federici S, Kredo-Russo S, Valdés-Mas R, Kviatcovsky D, Weinstock E, Matiuhin Y, Silberberg Y, Atarashi K, Furuichi M, Oka A, Liu B, Fibelman M, Weiner IN, Khabra E, Cullin N, Ben-Yishai N, Inbar D, Ben-David H, Nicenboim J, Kowalsman N, Lieb W, Kario E, Cohen T, Geffen YF, Zelcbuch L, Cohen A, Rappo U, Gahali-Sass I, Golembo M, Lev V, Dori-Bachash M, Shapiro H, Moresi C, Cuevas-Sierra A, Mohapatra G, Kern L, Zheng D, Nobs SP, Suez J, Stettner N, Harmelin A, Zak N, Puttagunta S, Bassan M, Honda K, Sokol H, Bang C, Franke A, Schramm C, Maharshak N, Sartor RB, Sorek R, Elinav E. Federici S, et al. Cell. 2022 Aug 4;185(16):2879-2898.e24. doi: 10.1016/j.cell.2022.07.003. Epub 2022 Aug 4. Cell. 2022. PMID: 35931020 Free article.
In four geographically distinct IBD cohorts (n = 537), we identify a clade of Klebsiella pneumoniae (Kp) strains, featuring a unique antibiotics resistance and mobilome signature, to be strongly associated with disease exacerbation and severity. ...Stepwise generation of a …
In four geographically distinct IBD cohorts (n = 537), we identify a clade of Klebsiella pneumoniae (Kp) strains, featuring a unique …
Towards an integrated phylogenetic classification of the Tremellomycetes.
Liu XZ, Wang QM, Göker M, Groenewald M, Kachalkin AV, Lumbsch HT, Millanes AM, Wedin M, Yurkov AM, Boekhout T, Bai FY. Liu XZ, et al. Stud Mycol. 2015 Jun;81:85-147. doi: 10.1016/j.simyco.2015.12.001. Epub 2016 Jan 8. Stud Mycol. 2015. PMID: 26955199 Free PMC article.
In addition, a comprehensive phylogenetic analysis on an expanded LSU rRNA (D1/D2 domains) gene sequence dataset covering as many as available teleomorphic and filamentous taxa within Tremellomycetes was performed to investigate the relationships between yeasts and filamentous ta …
In addition, a comprehensive phylogenetic analysis on an expanded LSU rRNA (D1/D2 domains) gene sequence dataset covering as many as availab …
Phylogeny and taxonomy of Erysiphe berberidis (s. lat.) revisited.
Liu L, Bradshaw M, Braun U, Götz M, Khodaparast SA, Liu TZ, Bulgakov TS, Darsaraei H, Hofbauer WK, Li Y, Liu SY. Liu L, et al. Mycoscience. 2022 Sep 30;63(5):222-234. doi: 10.47371/mycosci.2022.07.00. eCollection 2022. Mycoscience. 2022. PMID: 37090198 Free PMC article.
In phylogenetic tree, all sequences cluster in a large strongly supported clade, without any indication and support for further differentiation into cryptic species. ...
In phylogenetic tree, all sequences cluster in a large strongly supported clade, without any indication and support for further diffe …
A low-latitude species pump: Peripheral isolation, parapatric speciation and mating-system evolution converge in a marine radiation.
Almeida SC, Neiva J, Sousa F, Martins N, Cox CJ, Melo-Ferreira J, Guiry MD, Serrão EA, Pearson GA. Almeida SC, et al. Mol Ecol. 2022 Sep;31(18):4797-4817. doi: 10.1111/mec.16623. Epub 2022 Aug 8. Mol Ecol. 2022. PMID: 35869812
Species tree methods using 876 single-copy nuclear genes and extensive geographic coverage produced conflicting topologies with respect to geographic clades of F. vesiculosus. All methods, however, revealed a new and early diverging hermaphrodite species, Fucus macr …
Species tree methods using 876 single-copy nuclear genes and extensive geographic coverage produced conflicting topologies with respect to g …
Cryptic extinction risk in a western Pacific lizard radiation.
McDonald PJ, Brown RM, Kraus F, Bowles P, Arifin U, Eliades SJ, Fisher RN, Gaulke M, Grismer LL, Ineich I, Karin BR, Meneses CG, Richards SJ, Sanguila MB, Siler CD, Oliver PM. McDonald PJ, et al. Biodivers Conserv. 2022;31(8-9):2045-2062. doi: 10.1007/s10531-022-02412-x. Epub 2022 May 25. Biodivers Conserv. 2022. PMID: 35633848 Free PMC article.
When these factors overlap with drivers of extinction risk, such as insular distributions, the number of threatened species in a region or clade may be underestimated, a situation we term 'cryptic extinction risk'. ...
When these factors overlap with drivers of extinction risk, such as insular distributions, the number of threatened species in a region or …
Francisella tularensis and other bacteria in hares and ticks in North Rhine-Westphalia (Germany).
Tomaso H, Otto P, Peters M, Süss J, Karger A, Schamoni H, Zuchantke E, Hotzel H. Tomaso H, et al. Ticks Tick Borne Dis. 2018 Feb;9(2):325-329. doi: 10.1016/j.ttbdis.2017.11.007. Epub 2017 Nov 21. Ticks Tick Borne Dis. 2018. PMID: 29239792
The majority of F. tularensis isolates from hares (n=24; 96%) and genomic F. tularensis DNA recovered from ticks belonged to the basal genetic clade IV and subclade B.18. ...Only 4 tick pools were positive for F. tularensis and cultivation was not succ …
The majority of F. tularensis isolates from hares (n=24; 96%) and genomic F. tularensis DNA recovered from ticks belonged to t …
First Report of Phytophthora inundata Associated with Decline and Death of Walnut (Juglans regia L.) in Italy.
Haegi A, Luongo L, Garaguso I, Petrucci M, Vitale S. Haegi A, et al. Plant Dis. 2022 Dec 14. doi: 10.1094/PDIS-02-22-0362-PDN. Online ahead of print. Plant Dis. 2022. PMID: 36515926 Free article.
In addition to P. inundata, which belongs to the major Phytophthora ITS Clade 6, other members of the clade including P. megasperma (Belisario et al. 2012) and P. gonapodyides (Belisario et al. 2016) have been described as walnut pathogens. ...Biol. 30:17. https://d …
In addition to P. inundata, which belongs to the major Phytophthora ITS Clade 6, other members of the clade including P. megas …
A Novel Divergent Geminivirus Identified in Asymptomatic New World Cactaceae Plants.
Fontenele RS, Salywon AM, Majure LC, Cobb IN, Bhaskara A, Avalos-Calleros JA, Argüello-Astorga GR, Schmidlin K, Khalifeh A, Smith K, Schreck J, Lund MC, Köhler M, Wojciechowski MF, Hodgson WC, Puente-Martinez R, Van Doorslaer K, Kumari S, Vernière C, Filloux D, Roumagnac P, Lefeuvre P, Ribeiro SG, Kraberger S, Martin DP, Varsani A. Fontenele RS, et al. Viruses. 2020 Apr 3;12(4):398. doi: 10.3390/v12040398. Viruses. 2020. PMID: 32260283 Free PMC article.
A total of 79 apparently complete OpV1 genomes were recovered from 31 different cactus plants (belonging to 20 different cactus species from both the Cactoideae and Opuntioideae clades) and from nine cactus-feeding cochineal insects (Dactylopius sp.) sampled in the USA and …
A total of 79 apparently complete OpV1 genomes were recovered from 31 different cactus plants (belonging to 20 different cactus species from …
Morphology, phylogeny, and sexual stage of Fusarium caatingaense and Fusarium pernambucanum, new species of the Fusarium incarnatum-equiseti species complex associated with insects in Brazil.
Santos ACDS, Trindade JVC, Lima CS, Barbosa RDN, da Costa AF, Tiago PV, de Oliveira NT. Santos ACDS, et al. Mycologia. 2019 Mar-Apr;111(2):244-259. doi: 10.1080/00275514.2019.1573047. Epub 2019 Mar 29. Mycologia. 2019. PMID: 30924728
Multilocus phylogenetic analyses demonstrated that F. caatingaense and F. pernambucanum belong to the Incarnatum clade of the Fusarium incarnatum-equiseti species complex (FIESC). ...Crosses between F. caatingaense and F. pernambucanum did not r …
Multilocus phylogenetic analyses demonstrated that F. caatingaense and F. pernambucanum belong to the Incarnatum clade …
Insights into the Ecological Diversification of the Hymenochaetales based on Comparative Genomics and Phylogenomics With an Emphasis on Coltricia.
Zhao H, Dai YC, Wu F, Liu XY, Maurice S, Krutovsky KV, Pavlov IN, Lindner DL, Martin FM, Yuan Y. Zhao H, et al. Genome Biol Evol. 2023 Aug 1;15(8):evad136. doi: 10.1093/gbe/evad136. Genome Biol Evol. 2023. PMID: 37498334 Free PMC article.
Phylogenomic and molecular clock analyses showed that the EcM genus Coltricia formed a clade located at the base of the Hymenochaetaceae and divergence time later than saprophytic species. ...
Phylogenomic and molecular clock analyses showed that the EcM genus Coltricia formed a clade located at the base of the Hymenochaetac …
48 results