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Translating next generation sequencing to practice: opportunities and necessary steps.
Mol Oncol. 2013 Aug;7(4):743-55. doi: 10.1016/j.molonc.2013.04.008. Epub 2013 May 15.
Mol Oncol. 2013.
PMID: 23769412
Free PMC article.
Review.
Microbial functional pathways based on metatranscriptomic profiling enable effective saliva-based health assessments for precision wellness.
Patridge E, Gorakshakar A, Molusky MM, Ogundijo O, Janevski A, Julian C, Hu L, Vuyisich M, Banavar G.
Patridge E, et al. Among authors: janevski a.
Comput Struct Biotechnol J. 2024 Jan 29;23:834-842. doi: 10.1016/j.csbj.2024.01.018. eCollection 2024 Dec.
Comput Struct Biotechnol J. 2024.
PMID: 38328005
Free PMC article.
Item in Clipboard
Brief-exposure to preoperative bevacizumab reveals a TGF-β signature predictive of response in HER2-negative breast cancers.
Varadan V, Kamalakaran S, Gilmore H, Banerjee N, Janevski A, Miskimen KL, Williams N, Basavanhalli A, Madabhushi A, Lezon-Geyda K, Bossuyt V, Lannin DR, Abu-Khalaf M, Sikov W, Dimitrova N, Harris LN.
Varadan V, et al. Among authors: janevski a.
Int J Cancer. 2016 Feb 1;138(3):747-57. doi: 10.1002/ijc.29808. Epub 2015 Aug 31.
Int J Cancer. 2016.
PMID: 26284485
Free article.
Clinical Trial.
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A microRNA panel to discriminate carcinomas from high-grade intraepithelial neoplasms in colonoscopy biopsy tissue.
Wang S, Wang L, Bayaxi N, Li J, Verhaegh W, Janevski A, Varadan V, Ren Y, Merkle D, Meng X, Gao X, Wang H, Ren J, Kuo WP, Dimitrova N, Wu Y, Zhu H.
Wang S, et al. Among authors: janevski a.
Gut. 2013 Feb;62(2):280-9. doi: 10.1136/gutjnl-2011-301554. Epub 2012 Apr 25.
Gut. 2013.
PMID: 22535378
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Effective normalization for copy number variation detection from whole genome sequencing.
Janevski A, Varadan V, Kamalakaran S, Banerjee N, Dimitrova N.
Janevski A, et al.
BMC Genomics. 2012;13 Suppl 6(Suppl 6):S16. doi: 10.1186/1471-2164-13-S6-S16. Epub 2012 Oct 26.
BMC Genomics. 2012.
PMID: 23134596
Free PMC article.
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PAPAyA: a platform for breast cancer biomarker signature discovery, evaluation and assessment.
Janevski A, Kamalakaran S, Banerjee N, Varadan V, Dimitrova N.
Janevski A, et al.
BMC Bioinformatics. 2009 Sep 17;10 Suppl 9(Suppl 9):S7. doi: 10.1186/1471-2105-10-S9-S7.
BMC Bioinformatics. 2009.
PMID: 19761577
Free PMC article.
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DNA methylation patterns in luminal breast cancers differ from non-luminal subtypes and can identify relapse risk independent of other clinical variables.
Kamalakaran S, Varadan V, Giercksky Russnes HE, Levy D, Kendall J, Janevski A, Riggs M, Banerjee N, Synnestvedt M, Schlichting E, Kåresen R, Shama Prasada K, Rotti H, Rao R, Rao L, Eric Tang MH, Satyamoorthy K, Lucito R, Wigler M, Dimitrova N, Naume B, Borresen-Dale AL, Hicks JB.
Kamalakaran S, et al. Among authors: janevski a.
Mol Oncol. 2011 Feb;5(1):77-92. doi: 10.1016/j.molonc.2010.11.002. Epub 2010 Dec 2.
Mol Oncol. 2011.
PMID: 21169070
Free PMC article.
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