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phippery: a software suite for PhIP-Seq data analysis.
Galloway JG, Sung K, Minot SS, Garrett ME, Stoddard CI, Willcox AC, Yaffe ZA, Yucha R, Overbaugh J, Matsen FA. Galloway JG, et al. Among authors: yaffe za. Bioinformatics. 2023 Oct 3;39(10):btad583. doi: 10.1093/bioinformatics/btad583. Bioinformatics. 2023. PMID: 37740324 Free PMC article.
Elevated binding and functional antibody responses to SARS-CoV-2 in infants versus mothers.
Stoddard CI, Sung K, Yaffe ZA, Weight H, Beaudoin-Bussières G, Galloway J, Gantt S, Adhiambo J, Begnel ER, Ojee E, Slyker J, Wamalwa D, Kinuthia J, Finzi A, Matsen FA 4th, Lehman DA, Overbaugh J. Stoddard CI, et al. Among authors: yaffe za. Nat Commun. 2023 Aug 11;14(1):4864. doi: 10.1038/s41467-023-40554-w. Nat Commun. 2023. PMID: 37567924 Free PMC article.
HIV-1 protection: Antibodies move in for the kill.
Yaffe ZA, Overbaugh J. Yaffe ZA, et al. Cell Rep Med. 2021 Oct 19;2(10):100428. doi: 10.1016/j.xcrm.2021.100428. eCollection 2021 Oct 19. Cell Rep Med. 2021. PMID: 34755139 Free PMC article.
Elevated binding and functional antibody responses to SARS-CoV-2 in infants versus mothers.
Stoddard CI, Sung K, Yaffe ZA, Weight H, Beaudoin-Bussières G, Galloway J, Gantt S, Adhiambo J, Begnel ER, Ojee E, Slyker J, Wamalwa D, Kinuthia J, Finzi A, Matsen FA 4th, Lehman DA, Overbaugh J. Stoddard CI, et al. Among authors: yaffe za. bioRxiv [Preprint]. 2023 Feb 7:2023.02.06.527330. doi: 10.1101/2023.02.06.527330. bioRxiv. 2023. PMID: 36798400 Free PMC article. Updated. Preprint.