Open Genes-a new comprehensive database of human genes associated with aging and longevity

Nucleic Acids Res. 2024 Jan 5;52(D1):D950-D962. doi: 10.1093/nar/gkad712.

Abstract

The Open Genes database was created to enhance and simplify the search for potential aging therapy targets. We collected data on 2402 genes associated with aging and developed convenient tools for searching and comparing gene features. A comprehensive description of genes has been provided, including lifespan-extending interventions, age-related changes, longevity associations, gene evolution, associations with diseases and hallmarks of aging, and functions of gene products. For each experiment, we presented the necessary structured data for evaluating the experiment's quality and interpreting the study's findings. Our goal was to stay objective and precise while connecting a particular gene to human aging. We distinguished six types of studies and 12 criteria for adding genes to our database. Genes were classified according to the confidence level of the link between the gene and aging. All the data collected in a database are provided both by an API and a user interface. The database is publicly available on a website at https://open-genes.org/.

MeSH terms

  • Aging* / genetics
  • Databases, Genetic*
  • Humans
  • Longevity* / genetics
  • RNA

Substances

  • RNA