Yuji Sugita - Search Results

Year	Number of Results
2002	6
2003	10
2004	5
2005	9
2006	1
2007	1
2008	3
2009	3
2010	8
2011	9
2012	11
2013	12
2014	8
2015	9
2016	11
2017	10
2018	11
2019	19
2020	15
2021	15
2022	14
2023	8
2024	6

1

Protein assembly and crowding simulations.

Heo L, Sugita Y, Feig M. Heo L, et al. Among authors: sugita y. Curr Opin Struct Biol. 2022 Apr;73:102340. doi: 10.1016/j.sbi.2022.102340. Epub 2022 Feb 23. Curr Opin Struct Biol. 2022. PMID: 35219215 Free PMC article. Review.

2

Whole-Cell Models and Simulations in Molecular Detail.

Feig M, Sugita Y. Feig M, et al. Among authors: sugita y. Annu Rev Cell Dev Biol. 2019 Oct 6;35:191-211. doi: 10.1146/annurev-cellbio-100617-062542. Epub 2019 Jul 12. Annu Rev Cell Dev Biol. 2019. PMID: 31299173 Free PMC article. Review.

3

Weight average approaches for predicting dynamical properties of biomolecules.

Yagi K, Re S, Mori T, Sugita Y. Yagi K, et al. Among authors: sugita y. Curr Opin Struct Biol. 2022 Feb;72:88-94. doi: 10.1016/j.sbi.2021.08.008. Epub 2021 Sep 27. Curr Opin Struct Biol. 2022. PMID: 34592697 Review.

4

Protein folding simulations by generalized-ensemble algorithms.

Yoda T, Sugita Y, Okamoto Y. Yoda T, et al. Among authors: sugita y. Adv Exp Med Biol. 2014;805:1-27. doi: 10.1007/978-3-319-02970-2_1. Adv Exp Med Biol. 2014. PMID: 24446355 Review.

5

Faces of Contemporary CryoEM Information and Modeling.

Palermo G, Sugita Y, Wriggers W, Amaro RE. Palermo G, et al. Among authors: sugita y. J Chem Inf Model. 2020 May 26;60(5):2407-2409. doi: 10.1021/acs.jcim.0c00481. J Chem Inf Model. 2020. PMID: 32452204 Free PMC article. No abstract available.

6

Replica-Exchange Methods for Biomolecular Simulations.

Sugita Y, Kamiya M, Oshima H, Re S. Sugita Y, et al. Methods Mol Biol. 2019;2022:155-177. doi: 10.1007/978-1-4939-9608-7_7. Methods Mol Biol. 2019. PMID: 31396903

7

Use of single-molecule time-series data for refining conformational dynamics in molecular simulations.

Matsunaga Y, Sugita Y. Matsunaga Y, et al. Among authors: sugita y. Curr Opin Struct Biol. 2020 Apr;61:153-159. doi: 10.1016/j.sbi.2019.12.022. Epub 2020 Jan 28. Curr Opin Struct Biol. 2020. PMID: 32004808 Free article. Review.

8

Towards de novo design of transmembrane α-helical assemblies using structural modelling and molecular dynamics simulation.

Niitsu A, Sugita Y. Niitsu A, et al. Among authors: sugita y. Phys Chem Chem Phys. 2023 Feb 1;25(5):3595-3606. doi: 10.1039/d2cp03972a. Phys Chem Chem Phys. 2023. PMID: 36647771 Review.

9

Use of multistate Bennett acceptance ratio method for free-energy calculations from enhanced sampling and free-energy perturbation.

Matsunaga Y, Kamiya M, Oshima H, Jung J, Ito S, Sugita Y. Matsunaga Y, et al. Among authors: sugita y. Biophys Rev. 2022 Dec 14;14(6):1503-1512. doi: 10.1007/s12551-022-01030-9. eCollection 2022 Dec. Biophys Rev. 2022. PMID: 36659993 Free PMC article. Review.

10

Frontiers in CryoEM Modeling.

Palermo G, Sugita Y, Wriggers W, Amaro RE. Palermo G, et al. Among authors: sugita y. J Chem Inf Model. 2019 Jul 22;59(7):3091-3093. doi: 10.1021/acs.jcim.9b00412. Epub 2019 Jun 13. J Chem Inf Model. 2019. PMID: 31192591 Free PMC article. No abstract available.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Results by year

Text availability

Article attribute

Article type

Publication date

187 results

Results by year

Search Page

Filters

My NCBI Filters

Results by year

Text availability

Article attribute

Article type

Publication date

Search Results

187 results

Results by year