Yuedong Yang - Search Results

Year	Number of Results
2005	3
2006	1
2008	2
2009	2
2010	4
2011	6
2012	3
2013	6
2014	6
2015	7
2016	16
2017	18
2018	17
2019	17
2020	11
2021	22
2022	34
2023	23
2024	16

1

AlphaFold2-aware protein-DNA binding site prediction using graph transformer.

Yuan Q, Chen S, Rao J, Zheng S, Zhao H, Yang Y. Yuan Q, et al. Among authors: yang y. Brief Bioinform. 2022 Mar 10;23(2):bbab564. doi: 10.1093/bib/bbab564. Brief Bioinform. 2022. PMID: 35039821

2

Spatial transcriptomics prediction from histology jointly through Transformer and graph neural networks.

Zeng Y, Wei Z, Yu W, Yin R, Yuan Y, Li B, Tang Z, Lu Y, Yang Y. Zeng Y, et al. Among authors: yang y. Brief Bioinform. 2022 Sep 20;23(5):bbac297. doi: 10.1093/bib/bbac297. Brief Bioinform. 2022. PMID: 35849101

3

Comparative global B cell receptor repertoire difference induced by SARS-CoV-2 infection or vaccination via single-cell V(D)J sequencing.

He B, Liu S, Xu M, Hu Y, Lv K, Wang Y, Ma Y, Zhai Y, Yue X, Liu L, Lu H, Zhou S, Li P, Mai G, Huang X, Li C, Chen S, Ye S, Zhao P, Yang Y, Li X, Jie Y, Shi M, Yang J, Shu Y, Chen YQ. He B, et al. Among authors: yang y. Emerg Microbes Infect. 2022 Dec;11(1):2007-2020. doi: 10.1080/22221751.2022.2105261. Emerg Microbes Infect. 2022. PMID: 35899581 Free PMC article.

4

Inferring the genetic relationship between brain imaging-derived phenotypes and risk of complex diseases by Mendelian randomization and genome-wide colocalization.

Lin S, Zhang H, Qi M, Cooper DN, Yang Y, Yang Y, Zhao H. Lin S, et al. Among authors: yang y. Neuroimage. 2023 Oct 1;279:120325. doi: 10.1016/j.neuroimage.2023.120325. Epub 2023 Aug 12. Neuroimage. 2023. PMID: 37579999 Free article.

5

Computational Prediction of Carbohydrate-Binding Proteins and Binding Sites.

Zhao H, Taherzadeh G, Zhou Y, Yang Y. Zhao H, et al. Among authors: yang y. Curr Protoc Protein Sci. 2018 Nov;94(1):e75. doi: 10.1002/cpps.75. Epub 2018 Aug 14. Curr Protoc Protein Sci. 2018. PMID: 30106511 Review.

6

SPOT-ligand 2: improving structure-based virtual screening by binding-homology search on an expanded structural template library.

Litfin T, Zhou Y, Yang Y. Litfin T, et al. Among authors: yang y. Bioinformatics. 2017 Apr 15;33(8):1238-1240. doi: 10.1093/bioinformatics/btw829. Bioinformatics. 2017. PMID: 28057679

7

Mendelian randomization suggests a potential causal effect of eosinophil count on influenza vaccination responsiveness.

Chen H, Zhang H, Wen S, Xiu X, You D, Zhao H, Wang D, Yang Y, Shu Y. Chen H, et al. Among authors: yang y. J Med Virol. 2023 Jan;95(1):e28394. doi: 10.1002/jmv.28394. J Med Virol. 2023. PMID: 36495182

8

The recent progress of deep-learning-based in silico prediction of drug combination.

Liu H, Fan Z, Lin J, Yang Y, Ran T, Chen H. Liu H, et al. Among authors: yang y. Drug Discov Today. 2023 Jul;28(7):103625. doi: 10.1016/j.drudis.2023.103625. Epub 2023 May 25. Drug Discov Today. 2023. PMID: 37236526 Review.

9

Improving protein disorder prediction by deep bidirectional long short-term memory recurrent neural networks.

Hanson J, Yang Y, Paliwal K, Zhou Y. Hanson J, et al. Among authors: yang y. Bioinformatics. 2017 Mar 1;33(5):685-692. doi: 10.1093/bioinformatics/btw678. Bioinformatics. 2017. PMID: 28011771

10

Meta Learning for Low-Resource Molecular Optimization.

Wang J, Zheng S, Chen J, Yang Y. Wang J, et al. Among authors: yang y. J Chem Inf Model. 2021 Apr 26;61(4):1627-1636. doi: 10.1021/acs.jcim.0c01416. Epub 2021 Mar 17. J Chem Inf Model. 2021. PMID: 33729779

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