Vinhthuy Phan - Search Results

Year	Number of Results
2008	2
2009	2
2010	2
2011	1
2014	2
2015	1
2016	1
2017	2
2018	1
2019	1
2020	1
2022	1
2024	0

1

Representing bacteria with unique genomic signatures.

Pham DT, Phan V. Pham DT, et al. Among authors: phan v. Front Big Data. 2022 Nov 16;5:1018356. doi: 10.3389/fdata.2022.1018356. eCollection 2022. Front Big Data. 2022. PMID: 36466712 Free PMC article.

2

icHET: interactive visualization of cytoplasmic heteroplasmy.

Phan V, Pham DT, Melton C, Ramsey AJ, Daigle BJ, Mandel JR. Phan V, et al. Bioinformatics. 2019 Nov 1;35(21):4411-4412. doi: 10.1093/bioinformatics/btz300. Bioinformatics. 2019. PMID: 31038667

3

Assembling Reads Improves Taxonomic Classification of Species.

Tran Q, Phan V. Tran Q, et al. Among authors: phan v. Genes (Basel). 2020 Aug 17;11(8):946. doi: 10.3390/genes11080946. Genes (Basel). 2020. PMID: 32824429 Free PMC article.

4

Chemical genomics of cancer chemopreventive dithiolethiones.

Tran QT, Xu L, Phan V, Goodwin SB, Rahman M, Jin VX, Sutter CH, Roebuck BD, Kensler TW, George EO, Sutter TR. Tran QT, et al. Among authors: phan v. Carcinogenesis. 2009 Mar;30(3):480-6. doi: 10.1093/carcin/bgn292. Epub 2009 Jan 6. Carcinogenesis. 2009. PMID: 19126641 Free PMC article.

5

Analyzing microarray data with transitive directed acyclic graphs.

Phan V, Olusegun George E, Tran QT, Goodwin S, Bodreddigari S, Sutter TR. Phan V, et al. J Bioinform Comput Biol. 2009 Feb;7(1):135-56. doi: 10.1142/s0219720009003972. J Bioinform Comput Biol. 2009. PMID: 19226664 Free PMC article.

6

Leveraging known genomic variants to improve detection of variants, especially close-by Indels.

Vo NS, Phan V. Vo NS, et al. Among authors: phan v. Bioinformatics. 2018 Sep 1;34(17):2918-2926. doi: 10.1093/bioinformatics/bty183. Bioinformatics. 2018. PMID: 29590294

7

Using 16S rRNA gene as marker to detect unknown bacteria in microbial communities.

Tran Q, Pham DT, Phan V. Tran Q, et al. Among authors: phan v. BMC Bioinformatics. 2017 Dec 28;18(Suppl 14):499. doi: 10.1186/s12859-017-1901-8. BMC Bioinformatics. 2017. PMID: 29297282 Free PMC article.

8

How genome complexity can explain the difficulty of aligning reads to genomes.

Phan V, Gao S, Tran Q, Vo NS. Phan V, et al. BMC Bioinformatics. 2015;16 Suppl 17(Suppl 17):S3. doi: 10.1186/1471-2105-16-S17-S3. Epub 2015 Dec 7. BMC Bioinformatics. 2015. PMID: 26678826 Free PMC article.

9

Analysis of optimal alignments unfolds aligners' bias in existing variant profiles.

Tran Q, Gao S, Phan V. Tran Q, et al. Among authors: phan v. BMC Bioinformatics. 2016 Oct 6;17(Suppl 13):349. doi: 10.1186/s12859-016-1216-1. BMC Bioinformatics. 2016. PMID: 27766935 Free PMC article.

10

RandAL: a randomized approach to aligning DNA sequences to reference genomes.

Vo NS, Tran Q, Niraula N, Phan V. Vo NS, et al. Among authors: phan v. BMC Genomics. 2014;15 Suppl 5(Suppl 5):S2. doi: 10.1186/1471-2164-15-S5-S2. Epub 2014 Jul 14. BMC Genomics. 2014. PMID: 25081493 Free PMC article.

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