The Influence of the Halide in the Crystal Structures of 1-(2,3,5,6-Tetrafluoro-4-pyridyl)-3-benzylimidazolium Halides

Molecules. 2022 Nov 7;27(21):7634. doi: 10.3390/molecules27217634.

Abstract

The crystal structures of 1-(2,3,5,6-tetrafluoro-4-pyridyl)-3-benzylimidazolium chloride (1) and iodide (3) have been determined by single crystal X-ray diffraction. The crystal structure of 1 is similar to that of the bromide salt (2), possessing anion···C5F5N···C6H5 motifs, whilst that of 3 contains columns of alternating iodide anions and parallel tetrafluoropyridyl rings. All three crystal structures possess C(1)−H∙∙∙X− and C(2)−H∙∙∙X− hydrogen bonding. DFT calculations reveal that the strengths of the hydrogen bonding interactions lie in the order C(1)−H···X− > C(3)−H···X− > C(2)−H···X− for the same halide (X−) and Cl− > Br− > I− for each position. It is suggested that salt 3 adopts a different structure to salts 1 and 2 because of the larger size of iodide.

Keywords: DFT calculation; anion–π interaction; crystal structure; imidazolium salt; π–π stacking.

MeSH terms

  • Bromides* / chemistry
  • Chlorides / chemistry
  • Crystallography, X-Ray
  • Halogens
  • Hydrogen Bonding
  • Iodides*

Substances

  • Iodides
  • Bromides
  • Halogens
  • Chlorides

Grants and funding

This research received no external funding.