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Precision Neoantigen Discovery Using Large-Scale Immunopeptidomes and Composite Modeling of MHC Peptide Presentation.
Mol Cell Proteomics. 2023 Apr;22(4):100506. doi: 10.1016/j.mcpro.2023.100506. Epub 2023 Feb 14.
Mol Cell Proteomics. 2023.
PMID: 36796642
Free PMC article.
A machine learning algorithm with subclonal sensitivity reveals widespread pan-cancer human leukocyte antigen loss of heterozygosity.
Pyke RM, Mellacheruvu D, Dea S, Abbott CW, McDaniel L, Bhave DP, Zhang SV, Levy E, Bartha G, West J, Snyder MP, Chen RO, Boyle SM.
Pyke RM, et al. Among authors: dea s.
Nat Commun. 2022 Apr 12;13(1):1925. doi: 10.1038/s41467-022-29203-w.
Nat Commun. 2022.
PMID: 35414054
Free PMC article.
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Precision Neoantigen Discovery Using Large-scale Immunopeptidomes and Composite Modeling of MHC Peptide Presentation.
Pyke RM, Mellacheruvu D, Dea S, Abbott CW, Zhang SV, Phillips NA, Harris J, Bartha G, Desai S, McClory R, West J, Snyder MP, Chen R, Boyle SM.
Pyke RM, et al. Among authors: dea s.
Mol Cell Proteomics. 2021;20:100111. doi: 10.1016/j.mcpro.2021.100111. Epub 2021 Jun 12.
Mol Cell Proteomics. 2021.
PMID: 34126241
Free PMC article.
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Withdrawal of 'Precision Neoantigen Discovery Using Large-scale Immunopeptidomes and Composite Modeling of MHC Peptide Presentation'.
Pyke RM, Mellacheruvu D, Dea S, Abbott CW, Zhang SV, Phillips NA, Harris J, Bartha G, Desai S, McClory R, West J, Snyder MP, Chen R, Boyle SM.
Pyke RM, et al. Among authors: dea s.
Mol Cell Proteomics. 2023 Apr;22(4):100511. doi: 10.1016/j.mcpro.2023.100511. Epub 2023 Apr 3.
Mol Cell Proteomics. 2023.
PMID: 37019059
Free PMC article.
No abstract available.
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Functional and Mechanistic Neurotoxicity Profiling Using Human iPSC-Derived Neural 3D Cultures.
Sirenko O, Parham F, Dea S, Sodhi N, Biesmans S, Mora-Castilla S, Ryan K, Behl M, Chandy G, Crittenden C, Vargas-Hurlston S, Guicherit O, Gordon R, Zanella F, Carromeu C.
Sirenko O, et al. Among authors: dea s.
Toxicol Sci. 2019 Jan 1;167(1):58-76. doi: 10.1093/toxsci/kfy218.
Toxicol Sci. 2019.
PMID: 30169818
Free PMC article.
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Human iPSC-Derived 2D and 3D Platforms for Rapidly Assessing Developmental, Functional, and Terminal Toxicities in Neural Cells.
Slavin I, Dea S, Arunkumar P, Sodhi N, Montefusco S, Siqueira-Neto J, Seelke J, Lofstrom MA, Anson B, Zanella F, Carromeu C.
Slavin I, et al. Among authors: dea s.
Int J Mol Sci. 2021 Feb 14;22(4):1908. doi: 10.3390/ijms22041908.
Int J Mol Sci. 2021.
PMID: 33672998
Free PMC article.
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