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smiles markov
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Smilen Markov
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Probabilistic modelling of developmental neurotoxicity based on a simplified adverse outcome pathway network.
Comput Toxicol. 2022 Feb;21:100206. doi: 10.1016/j.comtox.2021.100206.
Comput Toxicol. 2022.
PMID: 35211661
Free PMC article.
ARGs-OAP v2.0 with an expanded SARG database and Hidden Markov Models for enhancement characterization and quantification of antibiotic resistance genes in environmental metagenomes.
Yin X, Jiang XT, Chai B, Li L, Yang Y, Cole JR, Tiedje JM, Zhang T.
Yin X, et al.
Bioinformatics. 2018 Jul 1;34(13):2263-2270. doi: 10.1093/bioinformatics/bty053.
Bioinformatics. 2018.
PMID: 29408954
In addition to annotation of high-throughput raw reads using a similarity search strategy, ARGs-OAP v2.0 now provides model-based identification of assembled sequences using SARGfam, a high-quality profile Hidden Markov Model (HMM), containing profiles of ARG subtypes. Add …
In addition to annotation of high-throughput raw reads using a similarity search strategy, ARGs-OAP v2.0 now provides model-based identifica …
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