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Sequential intrahost evolution and onward transmission of SARS-CoV-2 variants.
Gonzalez-Reiche AS, Alshammary H, Schaefer S, Patel G, Polanco J, Carreño JM, Amoako AA, Rooker A, Cognigni C, Floda D, van de Guchte A, Khalil Z, Farrugia K, Assad N, Zhang J, Alburquerque B; PARIS/PSP study group; Sominsky LA, Gleason C, Srivastava K, Sebra R, Ramirez JD, Banu R, Shrestha P, Krammer F, Paniz-Mondolfi A, Sordillo EM, Simon V, van Bakel H. Gonzalez-Reiche AS, et al. Nat Commun. 2023 Jun 3;14(1):3235. doi: 10.1038/s41467-023-38867-x. Nat Commun. 2023. PMID: 37270625 Free PMC article.
A Robust, Highly Multiplexed Mass Spectrometry Assay to Identify SARS-CoV-2 Variants.
Hernandez MM, Banu R, Shrestha P, Gonzalez-Reiche AS, van de Guchte A, Farrugia K, Sebra R; Mount Sinai PSP Study Group; Gitman MR, Nowak MD, Cordon-Cardo C, Simon V, van Bakel H, Sordillo EM, Luna N, Ramirez A, Castañeda SA, Patiño LH, Ballesteros N, Muñoz M, Ramírez JD, Paniz-Mondolfi AE. Hernandez MM, et al. Microbiol Spectr. 2022 Oct 26;10(5):e0173622. doi: 10.1128/spectrum.01736-22. Epub 2022 Sep 7. Microbiol Spectr. 2022. PMID: 36069609 Free PMC article.
Rates of Asymptomatic COVID-19 Infection and Associated Factors in Olmsted County, Minnesota, in the Prevaccination Era.
Vachon CM, Norman AD, Prasad K, Jensen D, Schaeferle GM, Vierling KL, Sherden M, Majerus MR, Bews KA, Heinzen EP, Hebl A, Yost KJ, Kennedy RB, Theel ES, Ghosh A, Fries M, Wi CI, Juhn YJ, Sampathkumar P, Morice WG 2nd, Rocca WA, Tande AJ, Cerhan JR, Limper AH, Ting HH, Farrugia G, Carter RE, Finney Rutten LJ, Jacobson RM, St Sauver J. Vachon CM, et al. Mayo Clin Proc Innov Qual Outcomes. 2022 Dec;6(6):605-617. doi: 10.1016/j.mayocpiqo.2022.10.001. Epub 2022 Oct 18. Mayo Clin Proc Innov Qual Outcomes. 2022. PMID: 36277251 Free PMC article.
OBJECTIVE: To estimate rates and identify factors associated with asymptomatic COVID-19 in the population of Olmsted County during the prevaccination era. PATIENTS AND METHODS: We screened first responders (n=191) and Olmsted County employees (n=564) for antibodies …
OBJECTIVE: To estimate rates and identify factors associated with asymptomatic COVID-19 in the population of Olmsted County during the preva …
Impact of the Coronavirus Disease 2019 (COVID-19) Vaccine on Asymptomatic Infection Among Patients Undergoing Preprocedural COVID-19 Molecular Screening.
Tande AJ, Pollock BD, Shah ND, Farrugia G, Virk A, Swift M, Breeher L, Binnicker M, Berbari EF. Tande AJ, et al. Clin Infect Dis. 2022 Jan 7;74(1):59-65. doi: 10.1093/cid/ciab229. Clin Infect Dis. 2022. PMID: 33704435 Free PMC article.
METHODS: We conducted a retrospective cohort study of consecutive, asymptomatic adult patients (n = 39 156) within a large US healthcare system who underwent 48 333 preprocedural SARS-CoV-2 molecular screening tests between 17 December 2020 and 8 February 2021. ...
METHODS: We conducted a retrospective cohort study of consecutive, asymptomatic adult patients (n = 39 156) within a large US healthc …
Mobility shift of beta-dystroglycan as a marker of GMPPB gene-related muscular dystrophy.
Sarkozy A, Torelli S, Mein R, Henderson M, Phadke R, Feng L, Sewry C, Ala P, Yau M, Bertoli M, Willis T, Hammans S, Manzur A, Sframeli M, Norwood F, Rakowicz W, Radunovic A, Vaidya SS, Parton M, Walker M, Marino S, Offiah C, Farrugia ME, Mamutse G, Marini-Bettolo C, Wraige E, Beeson D, Lochmüller H, Straub V, Bushby K, Barresi R, Muntoni F. Sarkozy A, et al. J Neurol Neurosurg Psychiatry. 2018 Jul;89(7):762-768. doi: 10.1136/jnnp-2017-316956. Epub 2018 Feb 3. J Neurol Neurosurg Psychiatry. 2018. PMID: 29437916
We further demonstrate that this mobility shift in patients with GMPPB was due to abnormal N-linked glycosylation of beta-DG. CONCLUSIONS: Our data demonstrate that a change in beta-DG electrophoretic mobility in patients with dystroglycanopathy is a distinctive marker of …
We further demonstrate that this mobility shift in patients with GMPPB was due to abnormal N-linked glycosylation of beta-DG. CONCLUS …
Measured and simulated nitrogen fluxes after field application of food-processing and municipal organic wastes.
Parnaudeau V, Génermont S, Hénault C, Farrugia A, Robert P, Nicolardot B. Parnaudeau V, et al. J Environ Qual. 2009 Jan 13;38(1):268-80. doi: 10.2134/jeq2007.0486. Print 2009 Jan-Feb. J Environ Qual. 2009. PMID: 19141817
Nitrogen mineralization from wastes represented 126 to 723 g N kg(-1) organic N added from the incorporation date to 14 May 2001 and was not related to the organic C to organic N ratio of wastes. Nitrogen lost by leaching during the equivalent period ranged f …
Nitrogen mineralization from wastes represented 126 to 723 g N kg(-1) organic N added from the incorporation date to 14 May 20 …
Clavulanate combinations with mecillinam, cefixime or cefpodoxime against ESBL-producing Enterobacterales frequently associated with blaOXA-1 in a paediatric population with febrile urinary tract infections.
Birgy A, Madhi F, Jung C, Levy C, Cointe A, Bidet P, Hobson CA, Bechet S, Sobral E, Vuthien H, Ferroni A, Aberrane S, Cuzon G, Beraud L, Gajdos V, Launay E, Pinquier D, Haas H, Desmarest M, Dommergues MA, Cohen R, Bonacorsi S; Group of the National Observatory of Urinary tract Infection due to ESBL-producing Enterobacteriaceae in children. Birgy A, et al. J Antimicrob Chemother. 2021 Oct 11;76(11):2839-2846. doi: 10.1093/jac/dkab289. J Antimicrob Chemother. 2021. PMID: 34453533
Neither therapeutic failure nor any subsequent positive control urine culture were reported for patients who received cefixime + amoxicillin/clavulanate as an oral relay therapy (n = 54). CONCLUSIONS: Despite the frequent association of ESBL genes with inhibitor-resistant …
Neither therapeutic failure nor any subsequent positive control urine culture were reported for patients who received cefixime + amoxicillin …
Respective roles of non-pharmaceutical interventions in bronchiolitis outbreaks: an interrupted time-series analysis based on a multinational surveillance system.
Lenglart L, Ouldali N, Honeyford K, Bognar Z, Bressan S, Buonsenso D, Da Dalt L, De T, Farrugia R, Maconochie IK, Moll HA, Oostenbrink R, Parri N, Roland D, Rose K, Akyüz Özkan E, Angoulvant F, Aupiais C, Barber C, Barrett M, Basmaci R, Castanhinha S, Chiaretti A, Durnin S, Fitzpatrick P, Fodor L, Gomez B, Greber-Platzer S, Guedj R, Hey F, Jankauskaite L, Kohlfuerst D, Mascarenhas I, Musolino AM, Pučuka Z, Reis S, Rybak A, Salamon P, Schaffert M, Shahar-Nissan K, Supino MC, Teksam O, Turan C, Velasco R, Nijman RG, Titomanlio L; EPISODES Study Group. Lenglart L, et al. Eur Respir J. 2023 Feb 16;61(2):2201172. doi: 10.1183/13993003.01172-2022. Print 2023 Feb. Eur Respir J. 2023. PMID: 36356971
Responses of paediatric emergency departments to the first wave of the COVID-19 pandemic in Europe: a cross-sectional survey study.
Rose K, Bressan S, Honeyford K, Bognar Z, Buonsenso D, Da Dalt L, De T, Farrugia R, Parri N, Oostenbrink R, Maconochie I, Moll HA, Roland D, Titomanlio L, Nijman R; in association with the REPEM network (Research in European Paediatric Emergency Medicine) as part of the EPISODES Study; in association with the REPEM network(Research in European Paediatric Emergency Medicine) as part of the EPISODES Study. Rose K, et al. BMJ Paediatr Open. 2021 Dec;5(1):e001269. doi: 10.1136/bmjpo-2021-001269. BMJ Paediatr Open. 2021. PMID: 35413003 Free PMC article.
Number of changes to health services, as a percentage of total possible changes encompassed by the survey, was compared with peak national SARS-CoV-2 incidence rates, and for both mixed and standalone paediatric centres. RESULTS: Overall, 97% (n=38) of centres remained ope …
Number of changes to health services, as a percentage of total possible changes encompassed by the survey, was compared with peak national S …
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