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Page 1
TreeTuner: A pipeline for minimizing redundancy and complexity in large phylogenetic datasets.
STAR Protoc. 2022 Feb 15;3(1):101175. doi: 10.1016/j.xpro.2022.101175. eCollection 2022 Mar 18.
STAR Protoc. 2022.
PMID: 35243369
Free PMC article.
Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs.
Curtis BA, Tanifuji G, Burki F, Gruber A, Irimia M, Maruyama S, Arias MC, Ball SG, Gile GH, Hirakawa Y, Hopkins JF, Kuo A, Rensing SA, Schmutz J, Symeonidi A, Elias M, Eveleigh RJ, Herman EK, Klute MJ, Nakayama T, Oborník M, Reyes-Prieto A, Armbrust EV, Aves SJ, Beiko RG, Coutinho P, Dacks JB, Durnford DG, Fast NM, Green BR, Grisdale CJ, Hempel F, Henrissat B, Höppner MP, Ishida K, Kim E, Kořený L, Kroth PG, Liu Y, Malik SB, Maier UG, McRose D, Mock T, Neilson JA, Onodera NT, Poole AM, Pritham EJ, Richards TA, Rocap G, Roy SW, Sarai C, Schaack S, Shirato S, Slamovits CH, Spencer DF, Suzuki S, Worden AZ, Zauner S, Barry K, Bell C, Bharti AK, Crow JA, Grimwood J, Kramer R, Lindquist E, Lucas S, Salamov A, McFadden GI, Lane CE, Keeling PJ, Gray MW, Grigoriev IV, Archibald JM.
Curtis BA, et al. Among authors: eveleigh rj.
Nature. 2012 Dec 6;492(7427):59-65. doi: 10.1038/nature11681. Epub 2012 Nov 28.
Nature. 2012.
PMID: 23201678
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Being Aquifex aeolicus: Untangling a hyperthermophile's checkered past.
Eveleigh RJ, Meehan CJ, Archibald JM, Beiko RG.
Eveleigh RJ, et al.
Genome Biol Evol. 2013;5(12):2478-97. doi: 10.1093/gbe/evt195.
Genome Biol Evol. 2013.
PMID: 24281050
Free PMC article.
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Treetrimmer: a method for phylogenetic dataset size reduction.
Maruyama S, Eveleigh RJ, Archibald JM.
Maruyama S, et al. Among authors: eveleigh rj.
BMC Res Notes. 2013 Apr 12;6:145. doi: 10.1186/1756-0500-6-145.
BMC Res Notes. 2013.
PMID: 23587045
Free PMC article.
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Complete sequence, analysis and organization of the Orgyia leucostigma nucleopolyhedrovirus genome.
Thumbi DK, Eveleigh RJ, Lucarotti CJ, Lapointe R, Graham RI, Pavlik L, Lauzon HA, Arif BM.
Thumbi DK, et al. Among authors: eveleigh rj.
Viruses. 2011 Nov;3(11):2301-27. doi: 10.3390/v3112301. Epub 2011 Nov 15.
Viruses. 2011.
PMID: 22163346
Free PMC article.
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Proteomics reveals plastid- and periplastid-targeted proteins in the chlorarachniophyte alga Bigelowiella natans.
Hopkins JF, Spencer DF, Laboissiere S, Neilson JA, Eveleigh RJ, Durnford DG, Gray MW, Archibald JM.
Hopkins JF, et al. Among authors: eveleigh rj.
Genome Biol Evol. 2012;4(12):1391-406. doi: 10.1093/gbe/evs115.
Genome Biol Evol. 2012.
PMID: 23221610
Free PMC article.
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