New Nuclease from Extremely Psychrophilic Microorganism Psychromonas ingrahamii 37: Identification and Characterization

Mol Biotechnol. 2019 Feb;61(2):122-133. doi: 10.1007/s12033-018-0142-z.

Abstract

Nucleases are an important group of hydrolases that degrade nucleic acids, with broad spectrum of applications in science and industry. In this paper, we report the identification and characterization of the nuclease from extremely psychrophilic bacterium Psychromonas ingrahamii that grows exponentially at 5 °C, but may also grow at even lower temperatures (down to - 12 °C). The putative endonuclease I gene, identified in the genome of P. ingrahamii, was cloned and expressed in Pichia pastoris. The recombinant protein was purified and its nucleolytic features were studied. The new enzyme, named by us as PinNuc, displays the features characteristic for the nonselective endonucleases, and has the ability to degrade different forms of nucleic acids. It is very active at room temperature in low ion-strength buffer and in the presence of low concentrations of magnesium ions. The enzyme, which possesses six cysteine residues, the most likely all engaged in disulphide bridges, is active only in oxidized form, and can be efficiently inactivated by the addition of low amounts of a reducing agent. According to our knowledge, it is the first nuclease, belonging to endonuclease I family, isolated from such extremely psychrophilic organism.

Keywords: Cold-active enzyme; Enzymatic activity; Nuclease; Psychromonas ingrahamii 37; Psychrophilic; Substrate specificity.

MeSH terms

  • Amino Acid Sequence
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Bacterial Proteins / physiology*
  • Deoxyribonuclease I / chemistry
  • Deoxyribonuclease I / genetics
  • Deoxyribonuclease I / metabolism
  • Deoxyribonuclease I / physiology*
  • Extremophiles / enzymology*
  • Gammaproteobacteria / enzymology*
  • Hydrogen-Ion Concentration
  • Pichia / genetics
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / isolation & purification
  • Recombinant Proteins / metabolism
  • Substrate Specificity
  • Temperature

Substances

  • Bacterial Proteins
  • Recombinant Proteins
  • Deoxyribonuclease I