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High-Throughput CRISPR-Cas13 SARS-CoV-2 Test.
Manning BJ, Khan WA, Peña JM, Fiore ES, Boisvert H, Tudino MC, Barney RE, Wilson MK, Singh S, Mowatt JA, Thompson HJ, Tsongalis GJ, Blake WJ. Manning BJ, et al. Among authors: barney re. Clin Chem. 2021 Dec 30;68(1):172-180. doi: 10.1093/clinchem/hvab238. Clin Chem. 2021. PMID: 34718481
Wastewater-Based SARS-CoV-2 Surveillance in Northern New England.
Toledo DM, Robbins AA, Gallagher TL, Hershberger KC, Barney RE, Salmela SM, Pilcher D, Cervinski MA, Nerenz RD, Szczepiorkowski ZM, Tsongalis GJ, Lefferts JA, Martin IW, Hubbard JA. Toledo DM, et al. Among authors: barney re. Microbiol Spectr. 2022 Apr 27;10(2):e0220721. doi: 10.1128/spectrum.02207-21. Epub 2022 Apr 12. Microbiol Spectr. 2022. PMID: 35412387 Free PMC article.
Identification of Spatial Proteomic Signatures of Colon Tumor Metastasis: A Digital Spatial Profiling Approach.
Levy JJ, Zavras JP, Veziroglu EM, Nasir-Moin M, Kolling FW, Christensen BC, Salas LA, Barney RE, Palisoul SM, Ren B, Liu X, Kerr DA, Pointer KB, Tsongalis GJ, Vaickus LJ. Levy JJ, et al. Among authors: barney re. Am J Pathol. 2023 Jun;193(6):778-795. doi: 10.1016/j.ajpath.2023.02.020. Epub 2023 Apr 8. Am J Pathol. 2023. PMID: 37037284 Free PMC article.
Inferring spatial transcriptomics markers from whole slide images to characterize metastasis-related spatial heterogeneity of colorectal tumors: A pilot study.
Fatemi M, Feng E, Sharma C, Azher Z, Goel T, Ramwala O, Palisoul SM, Barney RE, Perreard L, Kolling FW, Salas LA, Christensen BC, Tsongalis GJ, Vaickus LJ, Levy JJ. Fatemi M, et al. Among authors: barney re. J Pathol Inform. 2023 Mar 29;14:100308. doi: 10.1016/j.jpi.2023.100308. eCollection 2023. J Pathol Inform. 2023. PMID: 37114077 Free PMC article.
A Novel Method to Detect Copy Number Variation in Melanoma: Droplet Digital PCR for Quantitation of the CDKN2A Gene, a Proof-of-Concept Study.
McFadden JR, Syku M, Barney RE, Stevanovic M, Chaudhari AS, O'Hern KJ, Chambers M, Baker CM, LeBlanc RE, Doan L, Tsongalis GJ, Hughes EG, Sriharan A. McFadden JR, et al. Among authors: barney re. Am J Dermatopathol. 2023 Jul 1;45(7):454-462. doi: 10.1097/DAD.0000000000002436. Epub 2023 May 2. Am J Dermatopathol. 2023. PMID: 37130203 Free PMC article.
Analytical validation of a semi-automated methodology for quantitative measurement of SARS-CoV-2 RNA in wastewater collected in northern New England.
Robbins AA, Gallagher TL, Toledo DM, Hershberger KC, Salmela SM, Barney RE, Szczepiorkowski ZM, Tsongalis GJ, Martin IW, Hubbard JA, Lefferts JA. Robbins AA, et al. Among authors: barney re. Microbiol Spectr. 2024 Jun 4;12(6):e0112223. doi: 10.1128/spectrum.01122-23. Epub 2024 May 15. Microbiol Spectr. 2024. PMID: 38747589 Free article.