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Year | Number of Results |
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2022 | 1 |
2023 | 3 |
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Page 1
Reads2Vec: Efficient Embedding of Raw High-Throughput Sequencing Reads Data.
J Comput Biol. 2023 Apr;30(4):469-491. doi: 10.1089/cmb.2022.0424. Epub 2023 Feb 2.
J Comput Biol. 2023.
PMID: 36730750
When Protein Structure Embedding Meets Large Language Models.
Ali S, Chourasia P, Patterson M.
Ali S, et al. Among authors: chourasia p.
Genes (Basel). 2023 Dec 23;15(1):25. doi: 10.3390/genes15010025.
Genes (Basel). 2023.
PMID: 38254915
Free PMC article.
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ViralVectors: compact and scalable alignment-free virome feature generation.
Ali S, Chourasia P, Tayebi Z, Bello B, Patterson M.
Ali S, et al. Among authors: chourasia p.
Med Biol Eng Comput. 2023 Oct;61(10):2607-2626. doi: 10.1007/s11517-023-02837-8. Epub 2023 Jul 3.
Med Biol Eng Comput. 2023.
PMID: 37395885
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PWM2Vec: An Efficient Embedding Approach for Viral Host Specification from Coronavirus Spike Sequences.
Ali S, Bello B, Chourasia P, Punathil RT, Zhou Y, Patterson M.
Ali S, et al. Among authors: chourasia p.
Biology (Basel). 2022 Mar 9;11(3):418. doi: 10.3390/biology11030418.
Biology (Basel). 2022.
PMID: 35336792
Free PMC article.
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From PDB files to protein features: a comparative analysis of PDB bind and STCRDAB datasets.
Ali S, Chourasia P, Patterson M.
Ali S, et al. Among authors: chourasia p.
Med Biol Eng Comput. 2024 Apr 16. doi: 10.1007/s11517-024-03074-3. Online ahead of print.
Med Biol Eng Comput. 2024.
PMID: 38622438
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