Changes in hepatitis C virus genotype distribution in chronic hepatitis C infection patients

Indian J Med Microbiol. 2018 Jul-Sep;36(3):416-421. doi: 10.4103/ijmm.IJMM_18_10.

Abstract

Purpose: Identification of hepatitis C virus (HCV) genotypes is very important in the selection of antiviral treatment, dose adjustment of antiviral agents, determining the treatment duration and following-up of treatment response. We aimed to determine the distribution pattern of HCV genotypes in chronic hepatitis C infection (CHC) patients.

Materials and methods: We have included 106 CHC patients who were positive in the anti-HCV and HCV-RNA tests performed in our hospital during the 16-month period. Anti-HCV assays were performed on device using a chemiluminescent microparticle immunoassay, while HCV-RNA tests and HCV genotyping assays were performed by real-time polymerase chain reaction.

Results: Of the 106 cases; genotype 1b was detected in 67.0%, genotype 3 was detected in 16.0%, genotype 1a was detected in 14.2% and genotype 2 was detected in 2.8% patients. Genotypes 4, 5 and 6 were not detected in our study group. There were no statistically significant differences between the gender and age groups according to the HCV genotype distribution. The genotype 3 detection rate (16%) was the highest rate among the studies compared with the other studies in our country.

Conclusions: Events that cause social changes such as war and immigration and intense commercial and touristic activities affect and alter the HCV genotype distribution in HCV-infected patients. For this reason, further multicentre studies are required reflecting all the regions in order to determine the genotype distribution in HCV-infected patients at regular intervals.

Keywords: Chronic hepatitis C; genotyping; hepatitis C virus.

MeSH terms

  • Adolescent
  • Adult
  • Aged
  • Aged, 80 and over
  • Female
  • Genotype*
  • Genotyping Techniques
  • Hepacivirus / classification*
  • Hepacivirus / genetics*
  • Hepacivirus / isolation & purification
  • Hepatitis C Antibodies / blood
  • Hepatitis C, Chronic / virology*
  • Hospitals
  • Humans
  • Male
  • Middle Aged
  • RNA, Viral / blood
  • RNA, Viral / genetics
  • Real-Time Polymerase Chain Reaction
  • Retrospective Studies
  • Turkey
  • Young Adult

Substances

  • Hepatitis C Antibodies
  • RNA, Viral