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Gauge field theory of chirally folded homopolymers with applications to folded proteins.
Phys Rev E Stat Nonlin Soft Matter Phys. 2010 Aug;82(2 Pt 1):021910. doi: 10.1103/PhysRevE.82.021910. Epub 2010 Aug 11.
Phys Rev E Stat Nonlin Soft Matter Phys. 2010.
PMID: 20866840
Soliton driven relaxation dynamics and protein collapse in the villin headpiece.
Krokhotin A, Lundgren M, Niemi AJ, Peng X.
Krokhotin A, et al. Among authors: lundgren m.
J Phys Condens Matter. 2013 Aug 14;25(32):325103. doi: 10.1088/0953-8984/25/32/325103. Epub 2013 Jul 9.
J Phys Condens Matter. 2013.
PMID: 23838560
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Solitons and collapse in the λ-repressor protein.
Krokhotin A, Lundgren M, Niemi AJ.
Krokhotin A, et al. Among authors: lundgren m.
Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Aug;86(2 Pt 1):021923. doi: 10.1103/PhysRevE.86.021923. Epub 2012 Aug 30.
Phys Rev E Stat Nonlin Soft Matter Phys. 2012.
PMID: 23005801
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Protein loops, solitons, and side-chain visualization with applications to the left-handed helix region.
Lundgren M, Niemi AJ, Sha F.
Lundgren M, et al.
Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Jun;85(6 Pt 1):061909. doi: 10.1103/PhysRevE.85.061909. Epub 2012 Jun 11.
Phys Rev E Stat Nonlin Soft Matter Phys. 2012.
PMID: 23005129
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Discrete Frenet frame, inflection point solitons, and curve visualization with applications to folded proteins.
Hu S, Lundgren M, Niemi AJ.
Hu S, et al. Among authors: lundgren m.
Phys Rev E Stat Nonlin Soft Matter Phys. 2011 Jun;83(6 Pt 1):061908. doi: 10.1103/PhysRevE.83.061908. Epub 2011 Jun 15.
Phys Rev E Stat Nonlin Soft Matter Phys. 2011.
PMID: 21797404
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Elastic energy and phase structure in a continuous spin Ising chain with applications to chiral homopolymers.
Chernodub MN, Lundgren M, Niemi AJ.
Chernodub MN, et al. Among authors: lundgren m.
Phys Rev E Stat Nonlin Soft Matter Phys. 2011 Jan;83(1 Pt 1):011126. doi: 10.1103/PhysRevE.83.011126. Epub 2011 Jan 25.
Phys Rev E Stat Nonlin Soft Matter Phys. 2011.
PMID: 21405680
Free article.
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Correlation between protein secondary structure, backbone bond angles, and side-chain orientations.
Lundgren M, Niemi AJ.
Lundgren M, et al.
Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Aug;86(2 Pt 1):021904. doi: 10.1103/PhysRevE.86.021904. Epub 2012 Aug 6.
Phys Rev E Stat Nonlin Soft Matter Phys. 2012.
PMID: 23005782
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