DNA Polymerase I Large Fragment from Deinococcus radiodurans, a Candidate for a Cutting-Edge Room-Temperature LAMP

Int J Mol Sci. 2024 Jan 23;25(3):1392. doi: 10.3390/ijms25031392.

Abstract

In recent years, the loop-mediated isothermal amplification (LAMP) technique, designed for microbial pathogen detection, has acquired fundamental importance in the biomedical field, providing rapid and precise responses. However, it still has some drawbacks, mainly due to the need for a thermostatic block, necessary to reach 63 °C, which is the BstI DNA polymerase working temperature. Here, we report the identification and characterization of the DNA polymerase I Large Fragment from Deinococcus radiodurans (DraLF-PolI) that functions at room temperature and is resistant to various environmental stress conditions. We demonstrated that DraLF-PolI displays efficient catalytic activity over a wide range of temperatures and pH, maintains its activity even after storage under various stress conditions, including desiccation, and retains its strand-displacement activity required for isothermal amplification technology. All of these characteristics make DraLF-PolI an excellent candidate for a cutting-edge room-temperature LAMP that promises to be very useful for the rapid and simple detection of pathogens at the point of care.

Keywords: DNA polymerase; DNA replication; Deinococcus radiodurans; LAMP; extremophiles.

MeSH terms

  • DNA Polymerase I* / genetics
  • DNA Replication
  • DNA-Directed DNA Polymerase / genetics
  • Deinococcus* / genetics
  • Nucleic Acid Amplification Techniques
  • Temperature

Substances

  • DNA Polymerase I
  • DNA-Directed DNA Polymerase

Grants and funding

CNR project FOE-2021 DBA.AD005.225.