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Mathematical modeling of regulatory networks of intracellular processes - Aims and selected methods.
Comput Struct Biotechnol J. 2023 Feb 8;21:1523-1532. doi: 10.1016/j.csbj.2023.02.006. eCollection 2023.
Comput Struct Biotechnol J. 2023.
PMID: 36851915
Free PMC article.
Review.
Application of Sensitivity Analysis to Discover Potential Molecular Drug Targets.
Kardynska M, Smieja J, Paszek P, Puszynski K.
Kardynska M, et al.
Int J Mol Sci. 2022 Jun 13;23(12):6604. doi: 10.3390/ijms23126604.
Int J Mol Sci. 2022.
PMID: 35743048
Free PMC article.
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Post-transcriptional regulatory feedback encodes JAK-STAT signal memory of interferon stimulation.
Kalliara E, Kardynska M, Bagnall J, Spiller DG, Müller W, Ruckerl D, Śmieja J, Biswas SK, Paszek P.
Kalliara E, et al. Among authors: kardynska m.
Front Immunol. 2022 Sep 27;13:947213. doi: 10.3389/fimmu.2022.947213. eCollection 2022.
Front Immunol. 2022.
PMID: 36238296
Free PMC article.
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Heat shock response regulates stimulus-specificity and sensitivity of the pro-inflammatory NF-κB signalling.
Paszek A, Kardyńska M, Bagnall J, Śmieja J, Spiller DG, Widłak P, Kimmel M, Widlak W, Paszek P.
Paszek A, et al. Among authors: kardynska m.
Cell Commun Signal. 2020 May 24;18(1):77. doi: 10.1186/s12964-020-00583-0.
Cell Commun Signal. 2020.
PMID: 32448393
Free PMC article.
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Petri nets and ODEs as complementary methods for comprehensive analysis on an example of the ATM-p53-NF-[Formula: see text]B signaling pathways.
Gutowska K, Kogut D, Kardynska M, Formanowicz P, Smieja J, Puszynski K.
Gutowska K, et al. Among authors: kardynska m.
Sci Rep. 2022 Jan 21;12(1):1135. doi: 10.1038/s41598-022-04849-0.
Sci Rep. 2022.
PMID: 35064163
Free PMC article.
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Quantitative analysis reveals crosstalk mechanisms of heat shock-induced attenuation of NF-κB signaling at the single cell level.
Kardyńska M, Paszek A, Śmieja J, Spiller D, Widłak W, White MRH, Paszek P, Kimmel M.
Kardyńska M, et al.
PLoS Comput Biol. 2018 Apr 30;14(4):e1006130. doi: 10.1371/journal.pcbi.1006130. eCollection 2018 Apr.
PLoS Comput Biol. 2018.
PMID: 29708974
Free PMC article.
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