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Year Number of Results
2009 1
2010 1
2011 2
2012 2
2013 4
2014 2
2015 1
2016 1
2017 3
2020 1
2021 4
2022 4
2023 1
2024 1

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26 results

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Page 1
A global metagenomic map of urban microbiomes and antimicrobial resistance.
Danko D, Bezdan D, Afshin EE, Ahsanuddin S, Bhattacharya C, Butler DJ, Chng KR, Donnellan D, Hecht J, Jackson K, Kuchin K, Karasikov M, Lyons A, Mak L, Meleshko D, Mustafa H, Mutai B, Neches RY, Ng A, Nikolayeva O, Nikolayeva T, Png E, Ryon KA, Sanchez JL, Shaaban H, Sierra MA, Thomas D, Young B, Abudayyeh OO, Alicea J, Bhattacharyya M, Blekhman R, Castro-Nallar E, Cañas AM, Chatziefthimiou AD, Crawford RW, De Filippis F, Deng Y, Desnues C, Dias-Neto E, Dybwad M, Elhaik E, Ercolini D, Frolova A, Gankin D, Gootenberg JS, Graf AB, Green DC, Hajirasouliha I, Hastings JJA, Hernandez M, Iraola G, Jang S, Kahles A, Kelly FJ, Knights K, Kyrpides NC, Łabaj PP, Lee PKH, Leung MHY, Ljungdahl PO, Mason-Buck G, McGrath K, Meydan C, Mongodin EF, Moraes MO, Nagarajan N, Nieto-Caballero M, Noushmehr H, Oliveira M, Ossowski S, Osuolale OO, Özcan O, Paez-Espino D, Rascovan N, Richard H, Rätsch G, Schriml LM, Semmler T, Sezerman OU, Shi L, Shi T, Siam R, Song LH, Suzuki H, Court DS, Tighe SW, Tong X, Udekwu KI, Ugalde JA, Valentine B, Vassilev DI, Vayndorf EM, Velavan TP, Wu J, Zambrano MM, Zhu J, Zhu S, Mason CE; International MetaSUB Consortium. Danko D, et al. Among authors: bhattacharyya m. Cell. 2021 Jun 24;184(13):3376-3393.e17. doi: 10.1016/j.cell.2021.05.002. Epub 2021 May 26. Cell. 2021. PMID: 34043940 Free PMC article.
Supervised Machine Learning Enables Geospatial Microbial Provenance.
Bhattacharya C, Tierney BT, Ryon KA, Bhattacharyya M, Hastings JJA, Basu S, Bhattacharya B, Bagchi D, Mukherjee S, Wang L, Henaff EM, Mason CE. Bhattacharya C, et al. Among authors: bhattacharyya m. Genes (Basel). 2022 Oct 21;13(10):1914. doi: 10.3390/genes13101914. Genes (Basel). 2022. PMID: 36292799 Free PMC article.
COVID-19 drug practices risk antimicrobial resistance evolution.
Afshinnekoo E, Bhattacharya C, Burguete-García A, Castro-Nallar E, Deng Y, Desnues C, Dias-Neto E, Elhaik E, Iraola G, Jang S, Łabaj PP, Mason CE, Nagarajan N, Poulsen M, Prithiviraj B, Siam R, Shi T, Suzuki H, Werner J, Zambrano MM, Bhattacharyya M; MetaSUB Consortium. Afshinnekoo E, et al. Among authors: bhattacharyya m. Lancet Microbe. 2021 Apr;2(4):e135-e136. doi: 10.1016/S2666-5247(21)00039-2. Epub 2021 Feb 24. Lancet Microbe. 2021. PMID: 33655229 Free PMC article. No abstract available.
The conserved phylogeny of blood microbiome.
Bhattacharyya M, Ghosh T, Shankar S, Tomar N. Bhattacharyya M, et al. Mol Phylogenet Evol. 2017 Apr;109:404-408. doi: 10.1016/j.ympev.2017.02.001. Epub 2017 Feb 12. Mol Phylogenet Evol. 2017. PMID: 28216014
The importance of investing in data, models, experiments, team science, and public trust to help policymakers prepare for the next pandemic.
Grieve R, Yang Y, Abbott S, Babu GR, Bhattacharyya M, Dean N, Evans S, Jewell N, Langan SM, Lee W, Molenberghs G, Smeeth L, Williamson E, Mukherjee B. Grieve R, et al. Among authors: bhattacharyya m. PLOS Glob Public Health. 2023 Nov 30;3(11):e0002601. doi: 10.1371/journal.pgph.0002601. eCollection 2023. PLOS Glob Public Health. 2023. PMID: 38032861 Free PMC article. Review.
A history of the MetaSUB consortium: Tracking urban microbes around the globe.
Ryon KA, Tierney BT, Frolova A, Kahles A, Desnues C, Ouzounis C, Gibas C, Bezdan D, Deng Y, He D, Dias-Neto E, Elhaik E, Afshin E, Grills G, Iraola G, Suzuki H, Werner J, Udekwu K, Schriml L, Bhattacharyya M, Oliveira M, Zambrano MM, Hazrin-Chong NH, Osuolale O, Łabaj PP, Tiasse P, Rapuri S, Borras S, Pozdniakova S, Shi T, Sezerman U, Rodo X, Sezer ZH, Mason CE. Ryon KA, et al. Among authors: bhattacharyya m. iScience. 2022 Oct 20;25(11):104993. doi: 10.1016/j.isci.2022.104993. eCollection 2022 Nov 18. iScience. 2022. PMID: 36299999 Free PMC article.
Annotating unknown species of urban microorganisms on a global scale unveils novel functional diversity and local environment association.
Wu J, Danko D, Afshinnekoo E, Bezdan D, Bhattacharyya M, Castro-Nallar E, Chmielarczyk A, Hazrin-Chong NH, Deng Y, Dias-Neto E, Frolova A, Mason-Buck G, Iraola G, Jang S, Łabaj P, Lee PKH, Nieto-Caballero M, Osuolale OO, Ouzounis CA, Perlin MH, Prithiviraj B, Rascovan N, Różańska A, Schriml LM, Semmler T, Suzuki H, Ugalde JA, Young B, Werner J, Zambrano MM, Zhao Y, Mason C, Shi T; MetaSUB Consortium. Wu J, et al. Among authors: bhattacharyya m. Environ Res. 2022 May 1;207:112183. doi: 10.1016/j.envres.2021.112183. Epub 2021 Oct 9. Environ Res. 2022. PMID: 34637759
A biologically inspired measure for coexpression analysis.
Bandyopadhyay S, Bhattacharyya M. Bandyopadhyay S, et al. Among authors: bhattacharyya m. IEEE/ACM Trans Comput Biol Bioinform. 2011 Jul-Aug;8(4):929-42. doi: 10.1109/TCBB.2010.106. IEEE/ACM Trans Comput Biol Bioinform. 2011. PMID: 21566252
Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment.
Chng KR, Li C, Bertrand D, Ng AHQ, Kwah JS, Low HM, Tong C, Natrajan M, Zhang MH, Xu L, Ko KKK, Ho EXP, Av-Shalom TV, Teo JWP, Khor CC; MetaSUB Consortium; Chen SL, Mason CE, Ng OT, Marimuthu K, Ang B, Nagarajan N. Chng KR, et al. Nat Med. 2020 Jun;26(6):941-951. doi: 10.1038/s41591-020-0894-4. Epub 2020 Jun 8. Nat Med. 2020. PMID: 32514171 Free PMC article.
26 results