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Year | Number of Results |
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2017 | 1 |
2019 | 2 |
2020 | 2 |
2022 | 1 |
2024 | 1 |
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Page 1
Critical Assessment of Metagenome Interpretation: the second round of challenges.
Nat Methods. 2022 Apr;19(4):429-440. doi: 10.1038/s41592-022-01431-4. Epub 2022 Apr 8.
Nat Methods. 2022.
PMID: 35396482
Free PMC article.
SpaRC: scalable sequence clustering using Apache Spark.
Shi L, Meng X, Tseng E, Mascagni M, Wang Z.
Shi L, et al.
Bioinformatics. 2019 Mar 1;35(5):760-768. doi: 10.1093/bioinformatics/bty733.
Bioinformatics. 2019.
PMID: 30816928
Item in Clipboard
Computational Strategies for Scalable Genomics Analysis.
Shi L, Wang Z.
Shi L, et al.
Genes (Basel). 2019 Dec 6;10(12):1017. doi: 10.3390/genes10121017.
Genes (Basel). 2019.
PMID: 31817630
Free PMC article.
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DNABERT-S: LEARNING SPECIES-AWARE DNA EMBEDDING WITH GENOME FOUNDATION MODELS.
Zhou Z, Wu W, Ho H, Wang J, Shi L, Davuluri RV, Wang Z, Liu H.
Zhou Z, et al. Among authors: shi l.
ArXiv [Preprint]. 2024 Feb 15:arXiv:2402.08777v2.
ArXiv. 2024.
PMID: 38410647
Free PMC article.
Preprint.
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Transcriptome analysis of Actinoplanes utahensis reveals molecular signature of saccharide impact on acarbose biosynthesis.
Weng CY, Shi LZ, Wang YJ, Zheng YG.
Weng CY, et al.
3 Biotech. 2020 Nov;10(11):473. doi: 10.1007/s13205-020-02466-0. Epub 2020 Oct 12.
3 Biotech. 2020.
PMID: 33088668
Free PMC article.
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Deconvolute individual genomes from metagenome sequences through short read clustering.
Li K, Lu Y, Deng L, Wang L, Shi L, Wang Z.
Li K, et al. Among authors: shi l.
PeerJ. 2020 Apr 8;8:e8966. doi: 10.7717/peerj.8966. eCollection 2020.
PeerJ. 2020.
PMID: 32296615
Free PMC article.
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Construction and Optimization of a Large Gene Coexpression Network in Maize Using RNA-Seq Data.
Huang J, Vendramin S, Shi L, McGinnis KM.
Huang J, et al. Among authors: shi l.
Plant Physiol. 2017 Sep;175(1):568-583. doi: 10.1104/pp.17.00825. Epub 2017 Aug 2.
Plant Physiol. 2017.
PMID: 28768814
Free PMC article.
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