Systematic Analysis of Zinc Finger-Homeodomain Transcription Factors (ZF-HDs) in Barley (Hordeum vulgare L.)

Genes (Basel). 2024 May 1;15(5):578. doi: 10.3390/genes15050578.

Abstract

Zinc finger-homeodomain transcription factors (ZF-HDs) are pivotal in regulating plant growth, development, and diverse stress responses. In this study, we found 8 ZF-HD genes in barley genome. Theses eight HvZF-HD genes were located on five chromosomes, and classified into ZHD and MIF subfamily. The collinearity, gene structure, conserved motif, and cis-elements of HvZF-HD genes were also analyzed. Real-time PCR results suggested that the expression of HvZF-HD4, HvZF-HD6, HvZF-HD7 and HvZF-HD8 were up-regulated after hormones (ABA, GA3 and MeJA) or PEG treatments, especially HvZF-HD6 was significantly induced. These results provide useful information of ZF-HD genes to future study aimed at barley breeding.

Keywords: ZF-HD genes; barley (Hordeum vulgare L.); gene expression; genome-wide analysis.

MeSH terms

  • Chromosomes, Plant / genetics
  • Gene Expression Regulation, Plant*
  • Homeodomain Proteins / genetics
  • Homeodomain Proteins / metabolism
  • Hordeum* / genetics
  • Hordeum* / metabolism
  • Phylogeny
  • Plant Proteins* / genetics
  • Plant Proteins* / metabolism
  • Transcription Factors* / genetics
  • Transcription Factors* / metabolism
  • Zinc Fingers* / genetics

Substances

  • Plant Proteins
  • Transcription Factors
  • Homeodomain Proteins