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Showing results for bashir ali
Search for Kashir Ali instead (2 results)
The variant call format and VCFtools.
Danecek P, Auton A, Abecasis G, Albers CA, Banks E, DePristo MA, Handsaker RE, Lunter G, Marth GT, Sherry ST, McVean G, Durbin R; 1000 Genomes Project Analysis Group. Danecek P, et al. Bioinformatics. 2011 Aug 1;27(15):2156-8. doi: 10.1093/bioinformatics/btr330. Epub 2011 Jun 7. Bioinformatics. 2011. PMID: 21653522 Free PMC article.
An integrated map of structural variation in 2,504 human genomes.
Sudmant PH, Rausch T, Gardner EJ, Handsaker RE, Abyzov A, Huddleston J, Zhang Y, Ye K, Jun G, Fritz MH, Konkel MK, Malhotra A, Stütz AM, Shi X, Casale FP, Chen J, Hormozdiari F, Dayama G, Chen K, Malig M, Chaisson MJP, Walter K, Meiers S, Kashin S, Garrison E, Auton A, Lam HYK, Mu XJ, Alkan C, Antaki D, Bae T, Cerveira E, Chines P, Chong Z, Clarke L, Dal E, Ding L, Emery S, Fan X, Gujral M, Kahveci F, Kidd JM, Kong Y, Lameijer EW, McCarthy S, Flicek P, Gibbs RA, Marth G, Mason CE, Menelaou A, Muzny DM, Nelson BJ, Noor A, Parrish NF, Pendleton M, Quitadamo A, Raeder B, Schadt EE, Romanovitch M, Schlattl A, Sebra R, Shabalin AA, Untergasser A, Walker JA, Wang M, Yu F, Zhang C, Zhang J, Zheng-Bradley X, Zhou W, Zichner T, Sebat J, Batzer MA, McCarroll SA; 1000 Genomes Project Consortium; Mills RE, Gerstein MB, Bashir A, Stegle O, Devine SE, Lee C, Eichler EE, Korbel JO. Sudmant PH, et al. Among authors: bashir a. Nature. 2015 Oct 1;526(7571):75-81. doi: 10.1038/nature15394. Nature. 2015. PMID: 26432246 Free PMC article.
Valproate-induced subclinical hypothyroidism.
Rao P, Madhav Natu S, Mati Goel M, Ali B. Rao P, et al. Among authors: ali b. J Neuropsychiatry Clin Neurosci. 2008 Winter;20(1):111-2. doi: 10.1176/jnp.2008.20.1.111. J Neuropsychiatry Clin Neurosci. 2008. PMID: 18305299 No abstract available.
A foundational atlas of autism protein interactions reveals molecular convergence.
Wang B, Vartak R, Zaltsman Y, Naing ZZC, Hennick KM, Polacco BJ, Bashir A, Eckhardt M, Bouhaddou M, Xu J, Sun N, Lasser MC, Zhou Y, McKetney J, Guiley KZ, Chan U, Kaye JA, Chadha N, Cakir M, Gordon M, Khare P, Drake S, Drury V, Burke DF, Gonzalez S, Alkhairy S, Thomas R, Lam S, Morris M, Bader E, Seyler M, Baum T, Krasnoff R, Wang S, Pham P, Arbalaez J, Pratt D, Chag S, Mahmood N, Rolland T, Bourgeron T, Finkbeiner S, Swaney DL, Bandyopadhay S, Ideker T, Beltrao P, Willsey HR, Obernier K, Nowakowski TJ, Hüttenhain R, State MW, Willsey AJ, Krogan NJ. Wang B, et al. Among authors: bashir a. bioRxiv [Preprint]. 2024 Feb 8:2023.12.03.569805. doi: 10.1101/2023.12.03.569805. bioRxiv. 2024. PMID: 38076945 Free PMC article. Preprint.
Machine learning guided aptamer refinement and discovery.
Bashir A, Yang Q, Wang J, Hoyer S, Chou W, McLean C, Davis G, Gong Q, Armstrong Z, Jang J, Kang H, Pawlosky A, Scott A, Dahl GE, Berndl M, Dimon M, Ferguson BS. Bashir A, et al. Nat Commun. 2021 Apr 22;12(1):2366. doi: 10.1038/s41467-021-22555-9. Nat Commun. 2021. PMID: 33888692 Free PMC article.
Conditional Anonymous Remote Healthcare Data Sharing Over Blockchain.
Liu J, Jiang W, Sun R, Bashir AK, Alshehri MD, Hua Q, Yu K. Liu J, et al. Among authors: bashir ak. IEEE J Biomed Health Inform. 2023 May;27(5):2231-2242. doi: 10.1109/JBHI.2022.3183397. Epub 2023 May 4. IEEE J Biomed Health Inform. 2023. PMID: 35704539
Deep diversification of an AAV capsid protein by machine learning.
Bryant DH, Bashir A, Sinai S, Jain NK, Ogden PJ, Riley PF, Church GM, Colwell LJ, Kelsic ED. Bryant DH, et al. Among authors: bashir a. Nat Biotechnol. 2021 Jun;39(6):691-696. doi: 10.1038/s41587-020-00793-4. Epub 2021 Feb 11. Nat Biotechnol. 2021. PMID: 33574611
MsPAC: a tool for haplotype-phased structural variant detection.
Rodriguez OL, Ritz A, Sharp AJ, Bashir A. Rodriguez OL, et al. Among authors: bashir a. Bioinformatics. 2020 Feb 1;36(3):922-924. doi: 10.1093/bioinformatics/btz618. Bioinformatics. 2020. PMID: 31397844 Free PMC article.
83 results