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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1956 1
1957 1
1958 1
1959 1
1960 1
1989 1
1990 1
1992 3
1993 6
1994 1
1995 4
1996 1
1997 2
1998 3
2000 1
2001 1
2006 4
2007 3
2008 2
2009 6
2010 3
2011 3
2012 7
2013 3
2014 6
2015 8
2016 8
2017 6
2018 8
2019 10
2020 13
2021 10
2022 18
2023 7
2024 4

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144 results

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The following term was not found in PubMed: Soler-Morala
Page 1
Defining Dry Eye from a Clinical Perspective.
Tsubota K, Pflugfelder SC, Liu Z, Baudouin C, Kim HM, Messmer EM, Kruse F, Liang L, Carreno-Galeano JT, Rolando M, Yokoi N, Kinoshita S, Dana R. Tsubota K, et al. Int J Mol Sci. 2020 Dec 4;21(23):9271. doi: 10.3390/ijms21239271. Int J Mol Sci. 2020. PMID: 33291796 Free PMC article. Review.
Winds of change. A commentary on 'Demographic trade-offs and functional shifts in a hurricane-impacted tropical forest'.
Fortunel C. Fortunel C. Ann Bot. 2023 Aug 25;131(7):iii-v. doi: 10.1093/aob/mcad076. Ann Bot. 2023. PMID: 37462966
This article comments on: Maria Natalia Umana, Jessica Needham, Jimena Forero-Montana, Christopher J. Nytch, Nathan G. Swenson, Jill Thompson, Maria Uriarte and Jess K. ...
This article comments on: Maria Natalia Umana, Jessica Needham, Jimena Forero-Montana, Christopher J. Nytch, Nathan G. Swenson, Jill …
PRO-Simat: Protein network simulation and design tool.
Salihoglu R, Srivastava M, Liang C, Schilling K, Szalay A, Bencurova E, Dandekar T. Salihoglu R, et al. Comput Struct Biotechnol J. 2023 Apr 26;21:2767-2779. doi: 10.1016/j.csbj.2023.04.023. eCollection 2023. Comput Struct Biotechnol J. 2023. PMID: 37181657 Free PMC article.
It provides GO enrichment, KEGG pathway analyses, and network visualisation from an integrated database of more than 8 million protein-protein interactions across 32 model organisms and the human proteome. We integrated dynamical network simulation using the Jimena framewo …
It provides GO enrichment, KEGG pathway analyses, and network visualisation from an integrated database of more than 8 million protein-prote …
Modeling Immune Dynamics in Plants Using JIMENA-Package.
Osmanoglu Ö, Shams S, Dandekar T, Naseem M. Osmanoglu Ö, et al. Methods Mol Biol. 2021;2328:183-189. doi: 10.1007/978-1-0716-1534-8_11. Methods Mol Biol. 2021. PMID: 34251626
The pathogen constitutes an immune signaling network inside the host cells. We model plant immune dynamics by using JIMENA-package, which is a java-based genetic regulatory network (GRN) simulation framework. ...Here, we describe a step-by-step protocol to introduce the ap …
The pathogen constitutes an immune signaling network inside the host cells. We model plant immune dynamics by using JIMENA-package, w …
Muscle as a paracrine and endocrine organ.
Giudice J, Taylor JM. Giudice J, et al. Curr Opin Pharmacol. 2017 Jun;34:49-55. doi: 10.1016/j.coph.2017.05.005. Epub 2017 Jun 9. Curr Opin Pharmacol. 2017. PMID: 28605657 Free PMC article. Review.
More than a messenger: Alternative splicing as a therapeutic target.
Black AJ, Gamarra JR, Giudice J. Black AJ, et al. Biochim Biophys Acta Gene Regul Mech. 2019 Nov-Dec;1862(11-12):194395. doi: 10.1016/j.bbagrm.2019.06.006. Epub 2019 Jul 2. Biochim Biophys Acta Gene Regul Mech. 2019. PMID: 31271898 Free PMC article. Review.
Convergence behaviour and Control in Non-Linear Biological Networks.
Karl S, Dandekar T. Karl S, et al. Sci Rep. 2015 Jun 11;5:9746. doi: 10.1038/srep09746. Sci Rep. 2015. PMID: 26068060 Free PMC article.
Here we present a new approach to control centrality based on network convergence behaviour, implemented as an extension of our genetic regulatory network simulation framework Jimena ( http://stefan-karl.de/jimena). We distinguish three types of network control, and …
Here we present a new approach to control centrality based on network convergence behaviour, implemented as an extension of our genetic regu …
Software JimenaE allows efficient dynamic simulations of Boolean networks, centrality and system state analysis.
Kaltdorf M, Breitenbach T, Karl S, Fuchs M, Kessie DK, Psota E, Prelog M, Sarukhanyan E, Ebert R, Jakob F, Dandekar G, Naseem M, Liang C, Dandekar T. Kaltdorf M, et al. Sci Rep. 2023 Feb 1;13(1):1855. doi: 10.1038/s41598-022-27098-7. Sci Rep. 2023. PMID: 36725967 Free PMC article.
These specific features are not present in CellNetAnalyzer and BoolNet. JimenaE is an expert extension of Jimena, with new optimized code, network conversion into different formats, rapid convergence both for system state calculation as well as for all three network centra …
These specific features are not present in CellNetAnalyzer and BoolNet. JimenaE is an expert extension of Jimena, with new optimized …
144 results