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Page 1
Profiling gut microbiota and bile acid metabolism in critically ill children.
Kean IRL, Wagner J, Wijeyesekera A, De Goffau M, Thurston S, Clark JA, White DK, Ridout J, Agrawal S, Kayani R, O'Donnell R, Ramnarayan P, Peters MJ, Klein N, Holmes E, Parkhill J, Baker S, Pathan N. Kean IRL, et al. Sci Rep. 2022 Jun 21;12(1):10432. doi: 10.1038/s41598-022-13640-0. Sci Rep. 2022. PMID: 35729169 Free PMC article.
HAM-ART: An optimised culture-free Hi-C metagenomics pipeline for tracking antimicrobial resistance genes in complex microbial communities.
Kalmar L, Gupta S, Kean IRL, Ba X, Hadjirin N, Lay EM, de Vries SPW, Bateman M, Bartlet H, Hernandez-Garcia J, Tucker AW, Restif O, Stevens MP, Wood JLN, Maskell DJ, Grant AJ, Holmes MA. Kalmar L, et al. Among authors: kean irl. PLoS Genet. 2022 Mar 14;18(3):e1009776. doi: 10.1371/journal.pgen.1009776. eCollection 2022 Mar. PLoS Genet. 2022. PMID: 35286304 Free PMC article.
The rapid detection of respiratory pathogens in critically ill children.
Clark JA, Conway Morris A, Curran MD, White D, Daubney E, Kean IRL, Navapurkar V, Bartholdson Scott J, Maes M, Bousfield R, Török ME, Inwald D, Zhang Z, Agrawal S, Kanaris C, Khokhar F, Gouliouris T, Baker S, Pathan N. Clark JA, et al. Among authors: kean irl. Crit Care. 2023 Jan 10;27(1):11. doi: 10.1186/s13054-023-04303-1. Crit Care. 2023. PMID: 36627688 Free PMC article.
The effects of antibiotic use on the dynamics of the microbiome and resistome in pigs.
Tams KW, Larsen I, Hansen JE, Spiegelhauer H, Strøm-Hansen AD, Rasmussen S, Ingham AC, Kalmar L, Kean IRL, Angen Ø, Holmes MA, Pedersen K, Jelsbak L, Folkesson A, Larsen AR, Strube ML. Tams KW, et al. Anim Microbiome. 2023 Aug 21;5(1):39. doi: 10.1186/s42523-023-00258-4. Anim Microbiome. 2023. PMID: 37605221 Free PMC article.
Short-duration selective decontamination of the digestive tract infection control does not contribute to increased antimicrobial resistance burden in a pilot cluster randomised trial (the ARCTIC Study).
Kean IRL, Clark JA, Zhang Z, Daubney E, White D, Ferrando-Vivas P, Milla G, Cuthbertson B, Pappachan J, Klein N, Mouncey P, Rowan K, Myburgh J, Gouliouris T, Baker S, Parkhill J, Pathan N, Arctic Research Team. Kean IRL, et al. Gut. 2024 May 10;73(6):910-921. doi: 10.1136/gutjnl-2023-330851. Gut. 2024. PMID: 38253478 Free article. Clinical Trial.