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Page 1
A novel constrained genetic algorithm-based Boolean network inference method from steady-state gene expression data.
Bioinformatics. 2021 Jul 12;37(Suppl_1):i383-i391. doi: 10.1093/bioinformatics/btab295.
Bioinformatics. 2021.
PMID: 34252959
Free PMC article.
Effects of ordered mutations on dynamics in signaling networks.
Mazaya M, Trinh HC, Kwon YK.
Mazaya M, et al. Among authors: trinh hc.
BMC Med Genomics. 2020 Feb 20;13(Suppl 4):13. doi: 10.1186/s12920-019-0651-z.
BMC Med Genomics. 2020.
PMID: 32075651
Free PMC article.
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Edge-based sensitivity analysis of signaling networks by using Boolean dynamics.
Trinh HC, Kwon YK.
Trinh HC, et al.
Bioinformatics. 2016 Sep 1;32(17):i763-i771. doi: 10.1093/bioinformatics/btw464.
Bioinformatics. 2016.
PMID: 27587699
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RMut: R package for a Boolean sensitivity analysis against various types of mutations.
Trinh HC, Kwon YK.
Trinh HC, et al.
PLoS One. 2019 Mar 19;14(3):e0213736. doi: 10.1371/journal.pone.0213736. eCollection 2019.
PLoS One. 2019.
PMID: 30889216
Free PMC article.
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Construction and analysis of gene-gene dynamics influence networks based on a Boolean model.
Mazaya M, Trinh HC, Kwon YK.
Mazaya M, et al. Among authors: trinh hc.
BMC Syst Biol. 2017 Dec 21;11(Suppl 7):133. doi: 10.1186/s12918-017-0509-y.
BMC Syst Biol. 2017.
PMID: 29322926
Free PMC article.
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PANET: a GPU-based tool for fast parallel analysis of robustness dynamics and feed-forward/feedback loop structures in large-scale biological networks.
Trinh HC, Le DH, Kwon YK.
Trinh HC, et al.
PLoS One. 2014 Jul 24;9(7):e103010. doi: 10.1371/journal.pone.0103010. eCollection 2014.
PLoS One. 2014.
PMID: 25058310
Free PMC article.
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Effective Boolean dynamics analysis to identify functionally important genes in large-scale signaling networks.
Trinh HC, Kwon YK.
Trinh HC, et al.
Biosystems. 2015 Nov;137:64-72. doi: 10.1016/j.biosystems.2015.07.007. Epub 2015 Aug 12.
Biosystems. 2015.
PMID: 26276411
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