Hiroki Shirai - Search Results

Year	Number of Results
2002	1
2003	1
2005	1
2006	3
2007	4
2008	2
2009	1
2010	2
2011	2
2012	2
2013	3
2014	5
2015	1
2016	1
2019	1
2023	1
2024	0

1

Kuroda D, Shirai H, Jacobson MP, Nakamura H. Kuroda D, et al. Among authors: shirai h. Protein Eng Des Sel. 2012 Oct;25(10):507-21. doi: 10.1093/protein/gzs024. Epub 2012 Jun 2. Protein Eng Des Sel. 2012. PMID: 22661385 Free PMC article. Review.

2

Antibody informatics for drug discovery.

Shirai H, Prades C, Vita R, Marcatili P, Popovic B, Xu J, Overington JP, Hirayama K, Soga S, Tsunoyama K, Clark D, Lefranc MP, Ikeda K. Shirai H, et al. Biochim Biophys Acta. 2014 Nov;1844(11):2002-2015. doi: 10.1016/j.bbapap.2014.07.006. Epub 2014 Aug 8. Biochim Biophys Acta. 2014. PMID: 25110827 Review.

3

Increasing the melting temperature of VHH with the in silico free energy score.

Tomimoto Y, Yamazaki R, Shirai H. Tomimoto Y, et al. Among authors: shirai h. Sci Rep. 2023 Mar 25;13(1):4922. doi: 10.1038/s41598-023-32022-8. Sci Rep. 2023. PMID: 36966210 Free PMC article.

4

[Interface between bioinformatics and docking study].

Shirai H, Kobori M. Shirai H, et al. Yakugaku Zasshi. 2007 Jan;127(1):103-12. doi: 10.1248/yakushi.127.103. Yakugaku Zasshi. 2007. PMID: 17202790 Free article. Review. Japanese.

5

Kotai Antibody Builder: automated high-resolution structural modeling of antibodies.

Yamashita K, Ikeda K, Amada K, Liang S, Tsuchiya Y, Nakamura H, Shirai H, Standley DM. Yamashita K, et al. Among authors: shirai h. Bioinformatics. 2014 Nov 15;30(22):3279-80. doi: 10.1093/bioinformatics/btu510. Epub 2014 Jul 26. Bioinformatics. 2014. PMID: 25064566

6

Hematological and biochemical data obtained in rural northern Uganda.

Palacpac NM, Ntege E, Balikagala B, Yeka A, Shirai H, Suzuki N, Nsereko C, Kanoi BN, Okada T, Egwang TG, Horii T. Palacpac NM, et al. Among authors: shirai h. Int J Environ Res Public Health. 2014 May 6;11(5):4870-85. doi: 10.3390/ijerph110504870. Int J Environ Res Public Health. 2014. PMID: 24806194 Free PMC article.

7

[Current status, problems, and future directions of bioinformatics for drug discovery].

Shirai H, Kobori M. Shirai H, et al. Nihon Yakurigaku Zasshi. 2007 Jan;129(1):51-5. doi: 10.1254/fpj.129.51. Nihon Yakurigaku Zasshi. 2007. PMID: 17220577 Review. Japanese. No abstract available.

8

Exploring designability of electrostatic complementarity at an antigen-antibody interface directed by mutagenesis, biophysical analysis, and molecular dynamics simulations.

Yoshida K, Kuroda D, Kiyoshi M, Nakakido M, Nagatoishi S, Soga S, Shirai H, Tsumoto K. Yoshida K, et al. Among authors: shirai h. Sci Rep. 2019 Mar 14;9(1):4482. doi: 10.1038/s41598-019-40461-5. Sci Rep. 2019. PMID: 30872635 Free PMC article.

9

Use of amino acid composition to predict epitope residues of individual antibodies.

Soga S, Kuroda D, Shirai H, Kobori M, Hirayama N. Soga S, et al. Among authors: shirai h. Protein Eng Des Sel. 2010 Jun;23(6):441-8. doi: 10.1093/protein/gzq014. Epub 2010 Mar 19. Protein Eng Des Sel. 2010. PMID: 20304974

10

The SWIB and the MDM2 domains are homologous and share a common fold.

Bennett-Lovsey R, Hart SE, Shirai H, Mizuguchi K. Bennett-Lovsey R, et al. Among authors: shirai h. Bioinformatics. 2002 Apr;18(4):626-30. doi: 10.1093/bioinformatics/18.4.626. Bioinformatics. 2002. PMID: 12016060

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