Giulio Pavesi - Search Results

Year	Number of Results
2004	3
2005	1
2006	3
2007	5
2008	7
2009	7
2010	4
2011	4
2012	8
2013	6
2014	3
2015	5
2016	4
2017	6
2018	4
2019	4
2020	5
2021	7
2022	1
2023	2
2024	0

1

RIP-Seq data analysis to determine RNA-protein associations.

Zambelli F, Pavesi G. Zambelli F, et al. Among authors: pavesi g. Methods Mol Biol. 2015;1269:293-303. doi: 10.1007/978-1-4939-2291-8_18. Methods Mol Biol. 2015. PMID: 25577386

2

ChIP-Seq Data Analysis to Define Transcriptional Regulatory Networks.

Pavesi G. Pavesi G. Adv Biochem Eng Biotechnol. 2017;160:1-14. doi: 10.1007/10_2016_43. Adv Biochem Eng Biotechnol. 2017. PMID: 28070596 Free article. Review.

3

Next generation sequencing of SARS-CoV-2 genomes: challenges, applications and opportunities.

Chiara M, D'Erchia AM, Gissi C, Manzari C, Parisi A, Resta N, Zambelli F, Picardi E, Pavesi G, Horner DS, Pesole G. Chiara M, et al. Among authors: pavesi g. Brief Bioinform. 2021 Mar 22;22(2):616-630. doi: 10.1093/bib/bbaa297. Brief Bioinform. 2021. PMID: 33279989 Free PMC article.

4

Genome wide features, distribution and correlations of NF-Y binding sites.

Zambelli F, Pavesi G. Zambelli F, et al. Among authors: pavesi g. Biochim Biophys Acta Gene Regul Mech. 2017 May;1860(5):581-589. doi: 10.1016/j.bbagrm.2016.10.007. Epub 2016 Oct 18. Biochim Biophys Acta Gene Regul Mech. 2017. PMID: 27769808 Review.

5

On the NF-Y regulome as in ENCODE (2019).

Ronzio M, Bernardini A, Pavesi G, Mantovani R, Dolfini D. Ronzio M, et al. Among authors: pavesi g. PLoS Comput Biol. 2020 Dec 28;16(12):e1008488. doi: 10.1371/journal.pcbi.1008488. eCollection 2020 Dec. PLoS Comput Biol. 2020. PMID: 33370256 Free PMC article.

6

Bioinformatics approaches for genomics and post genomics applications of next-generation sequencing.

Horner DS, Pavesi G, Castrignanò T, De Meo PD, Liuni S, Sammeth M, Picardi E, Pesole G. Horner DS, et al. Among authors: pavesi g. Brief Bioinform. 2010 Mar;11(2):181-97. doi: 10.1093/bib/bbp046. Epub 2009 Oct 27. Brief Bioinform. 2010. PMID: 19864250 Review.

7

Evaluation of Quality Assessment Protocols for High Throughput Genome Resequencing Data.

Chiara M, Pavesi G. Chiara M, et al. Among authors: pavesi g. Front Genet. 2017 Jul 7;8:94. doi: 10.3389/fgene.2017.00094. eCollection 2017. Front Genet. 2017. PMID: 28736571 Free PMC article. Review.

8

MeCP2 post-translational modifications: a mechanism to control its involvement in synaptic plasticity and homeostasis?

Bellini E, Pavesi G, Barbiero I, Bergo A, Chandola C, Nawaz MS, Rusconi L, Stefanelli G, Strollo M, Valente MM, Kilstrup-Nielsen C, Landsberger N. Bellini E, et al. Among authors: pavesi g. Front Cell Neurosci. 2014 Aug 13;8:236. doi: 10.3389/fncel.2014.00236. eCollection 2014. Front Cell Neurosci. 2014. PMID: 25165434 Free PMC article. Review.

9

UTRdb 2.0: a comprehensive, expert curated catalog of eukaryotic mRNAs untranslated regions.

Lo Giudice C, Zambelli F, Chiara M, Pavesi G, Tangaro MA, Picardi E, Pesole G. Lo Giudice C, et al. Among authors: pavesi g. Nucleic Acids Res. 2023 Jan 6;51(D1):D337-D344. doi: 10.1093/nar/gkac1016. Nucleic Acids Res. 2023. PMID: 36399486 Free PMC article.

10

hmSEEKER: Identification of hmSILAC Doublets in MaxQuant Output Data.

Massignani E, Cuomo A, Musiani D, Jammula S, Pavesi G, Bonaldi T. Massignani E, et al. Among authors: pavesi g. Proteomics. 2019 Mar;19(5):e1800300. doi: 10.1002/pmic.201800300. Epub 2019 Feb 18. Proteomics. 2019. PMID: 30656827 Free article.

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