Synthesis of 5'-GalNAc-Conjugated Oligonucleotides: A Comparison of Solid and Solution-Phase Conjugation Strategies

Molecules. 2017 Aug 15;22(8):1356. doi: 10.3390/molecules22081356.

Abstract

Antisense oligonucleotides (ASOs) conjugated to triantennary N-acetyl galactosamine (GalNAc) ligands represent an emerging approach to antisense therapy. Our current generation of GalNAc-ASO conjugates link the GalNAc to the 5'-terminus of the ASO. The conjugation reaction can be accomplished using solution-phase or solid-phase techniques. Here we show a direct comparison of a solution-phase and a solid-phase conjugation strategy. The solution-phase approach, using amine-pentafluorophenyl (PFP) ester coupling, is higher yielding and gives material of slightly higher purity, but requires several additional unit operations and longer production time. The solid-phase approach, using a protected GalNAc ligand phosphoramidite, is more expedient, but results in lower yield and purity. Both strategies efficiently deliver conjugated material in excellent purity.

Keywords: GalNAc; conjugate; oligonucleotide.

Publication types

  • Comparative Study

MeSH terms

  • Acetylgalactosamine / chemistry*
  • Chemistry Techniques, Synthetic / methods*
  • Chromatography, High Pressure Liquid / methods
  • Magnetic Resonance Spectroscopy / methods
  • Mass Spectrometry / methods
  • Molecular Structure
  • Oligonucleotides, Antisense / chemistry*
  • Solid-Phase Synthesis Techniques / methods*
  • Solutions

Substances

  • Oligonucleotides, Antisense
  • Solutions
  • Acetylgalactosamine