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napari-imagej: ImageJ ecosystem access from napari.
Selzer GJ, Rueden CT, Hiner MC, Evans EL 3rd, Harrington KIS, Eliceiri KW. Selzer GJ, et al. Among authors: evans el 3rd. Nat Methods. 2023 Oct;20(10):1443-1444. doi: 10.1038/s41592-023-01990-0. Nat Methods. 2023. PMID: 37596471 Free PMC article. No abstract available.
PyImageJ: A library for integrating ImageJ and Python.
Rueden CT, Hiner MC, Evans EL 3rd, Pinkert MA, Lucas AM, Carpenter AE, Cimini BA, Eliceiri KW. Rueden CT, et al. Among authors: evans el 3rd. Nat Methods. 2022 Nov;19(11):1326-1327. doi: 10.1038/s41592-022-01655-4. Nat Methods. 2022. PMID: 36253645 Free PMC article. No abstract available.
A biologist's guide to planning and performing quantitative bioimaging experiments.
Senft RA, Diaz-Rohrer B, Colarusso P, Swift L, Jamali N, Jambor H, Pengo T, Brideau C, Llopis PM, Uhlmann V, Kirk J, Gonzales KA, Bankhead P, Evans EL 3rd, Eliceiri KW, Cimini BA. Senft RA, et al. Among authors: evans el 3rd. PLoS Biol. 2023 Jun 27;21(6):e3002167. doi: 10.1371/journal.pbio.3002167. eCollection 2023 Jun. PLoS Biol. 2023. PMID: 37368874 Free PMC article.
New Extensibility and Scripting Tools in the ImageJ Ecosystem.
Gahm NA, Rueden CT, Evans EL 3rd, Selzer G, Hiner MC, Chacko JV, Gao D, Sherer NM, Eliceiri KW. Gahm NA, et al. Among authors: evans el 3rd. Curr Protoc. 2021 Aug;1(8):e204. doi: 10.1002/cpz1.204. Curr Protoc. 2021. PMID: 34370407 Free PMC article.
Integration of the ImageJ Ecosystem in the KNIME Analytics Platform.
Dietz C, Rueden CT, Helfrich S, Dobson ETA, Horn M, Eglinger J, Evans EL 3rd, McLean DT, Novitskaya T, Ricke WA, Sherer NM, Zijlstra A, Berthold MR, Eliceiri KW. Dietz C, et al. Among authors: evans el 3rd. Front Comput Sci. 2020 Mar;2:8. doi: 10.3389/fcomp.2020.00008. Epub 2020 Mar 17. Front Comput Sci. 2020. PMID: 32905440 Free PMC article.