Douglas S. Domingues - Search Results

Year	Number of Results
2009	1
2010	1
2012	2
2013	2
2014	1
2015	4
2016	4
2017	5
2018	5
2019	6
2020	4
2021	5
2022	7
2023	4
2024	1

1

TERL: classification of transposable elements by convolutional neural networks.

da Cruz MHP, Domingues DS, Saito PTM, Paschoal AR, Bugatti PH. da Cruz MHP, et al. Brief Bioinform. 2021 May 20;22(3):bbaa185. doi: 10.1093/bib/bbaa185. Brief Bioinform. 2021. PMID: 34020551 Review.

2

mirtronDB: a mirtron knowledge base.

Da Fonseca BHR, Domingues DS, Paschoal AR. Da Fonseca BHR, et al. Bioinformatics. 2019 Oct 1;35(19):3873-3874. doi: 10.1093/bioinformatics/btz153. Bioinformatics. 2019. PMID: 30874795 Free PMC article.

3

An Atlas of Plant Transposable Elements.

Pedro DLF, Amorim TS, Varani A, Guyot R, Domingues DS, Paschoal AR. Pedro DLF, et al. F1000Res. 2021 Nov 24;10:1194. doi: 10.12688/f1000research.74524.1. eCollection 2021. F1000Res. 2021. PMID: 35035898 Free PMC article.

4

ceRNAs in plants: computational approaches and associated challenges for target mimic research.

Paschoal AR, Lozada-Chávez I, Domingues DS, Stadler PF. Paschoal AR, et al. Brief Bioinform. 2018 Nov 27;19(6):1273-1289. doi: 10.1093/bib/bbx058. Brief Bioinform. 2018. PMID: 28575144 Review.

5

Feature extraction approaches for biological sequences: a comparative study of mathematical features.

Bonidia RP, Sampaio LDH, Domingues DS, Paschoal AR, Lopes FM, de Carvalho ACPLF, Sanches DS. Bonidia RP, et al. Among authors: domingues ds. Brief Bioinform. 2021 Sep 2;22(5):bbab011. doi: 10.1093/bib/bbab011. Brief Bioinform. 2021. PMID: 33585910 Review.

6

Pattern recognition analysis on long noncoding RNAs: a tool for prediction in plants.

Negri TDC, Alves WAL, Bugatti PH, Saito PTM, Domingues DS, Paschoal AR. Negri TDC, et al. Brief Bioinform. 2019 Mar 25;20(2):682-689. doi: 10.1093/bib/bby034. Brief Bioinform. 2019. PMID: 29697740 Review.

7

Physiological and Molecular Responses of Woody Plants Exposed to Future Atmospheric CO₂ Levels under Abiotic Stresses.

Lobo AKM, Catarino ICA, Silva EA, Centeno DC, Domingues DS. Lobo AKM, et al. Among authors: domingues ds. Plants (Basel). 2022 Jul 20;11(14):1880. doi: 10.3390/plants11141880. Plants (Basel). 2022. PMID: 35890514 Free PMC article. Review.

8

Temporal progress of gene expression analysis with RNA-Seq data: A review on the relationship between computational methods.

Costa-Silva J, Domingues DS, Menotti D, Hungria M, Lopes FM. Costa-Silva J, et al. Among authors: domingues ds. Comput Struct Biotechnol J. 2022 Dec 1;21:86-98. doi: 10.1016/j.csbj.2022.11.051. eCollection 2023. Comput Struct Biotechnol J. 2022. PMID: 36514333 Free PMC article. Review.

9

Genome-Wide Analysis of Lipoxygenase (LOX) Genes in Angiosperms.

Camargo PO, Calzado NF, Budzinski IGF, Domingues DS. Camargo PO, et al. Plants (Basel). 2023 Jan 14;12(2):398. doi: 10.3390/plants12020398. Plants (Basel). 2023. PMID: 36679110 Free PMC article.

10

Computational Analysis of Transposable Elements and CircRNAs in Plants.

Oliveira LS, Patera AC, Domingues DS, Sanches DS, Lopes FM, Bugatti PH, Saito PTM, Maracaja-Coutinho V, Durham AM, Paschoal AR. Oliveira LS, et al. Methods Mol Biol. 2021;2362:147-172. doi: 10.1007/978-1-0716-1645-1_9. Methods Mol Biol. 2021. PMID: 34195962

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