The Qinzhou Bay-Hangzhou Bay joint belt is a significant tectonic zone between the Yangtze and Cathaysian plates, where plentiful hydrothermal siliceous rocks are generated. Here, the authors studied the distribution of the siliceous rocks in the whole tectonic zone, which indicated that the tensional setting was facilitating the development of siliceous rocks of hydrothermal genesis. According to the geochemical characteristics, the Neopalaeozoic siliceous rocks in the north segment of the Qinzhou Bay-Hangzhou Bay joint belt denoted its limited width. In comparison, the Neopalaeozoic Qinzhou Bay-Hangzhou Bay joint belt was diverse for its ocean basin in the different segments and possibly had subduction only in the south segment. The ocean basin of the north and middle segments was limited in its width without subduction and possibly existed as a rift trough that was unable to resist the terrigenous input. In the north segment of the Qinzhou Bay-Hangzhou Bay joint belt, the strata of hydrothermal siliceous rocks in Dongxiang copper-polymetallic ore deposit exhibited alternative cycles with the marine volcanic rocks, volcanic tuff, and metal sulphide. These sedimentary systems were formed in different circumstances, whose alternative cycles indicated the release of internal energy in several cycles gradually from strong to weak.