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The following term was not found in PubMed: Chrismianto
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Giant Reverse Transcriptase-Encoding Transposable Elements at Telomeres.
Arkhipova IR, Yushenova IA, Rodriguez F. Arkhipova IR, et al. Mol Biol Evol. 2017 Sep 1;34(9):2245-2257. doi: 10.1093/molbev/msx159. Mol Biol Evol. 2017. PMID: 28575409 Free PMC article.
As the principal polymerizing component, Terminons contain Athena reverse transcriptases previously described in bdelloid rotifers and belonging to the enigmatic group of Penelope-like elements, but can additionally accumulate multiple cooriented ORFs, including DEDDy 3'-e …
As the principal polymerizing component, Terminons contain Athena reverse transcriptases previously described in bdelloid rotifers and belon …
Degradation of unmethylated miRNA/miRNA*s by a DEDDy-type 3' to 5' exoribonuclease Atrimmer 2 in Arabidopsis.
Wang X, Wang Y, Dou Y, Chen L, Wang J, Jiang N, Guo C, Yao Q, Wang C, Liu L, Yu B, Zheng B, Chekanova JA, Ma J, Ren G. Wang X, et al. Proc Natl Acad Sci U S A. 2018 Jul 10;115(28):E6659-E6667. doi: 10.1073/pnas.1721917115. Epub 2018 Jun 25. Proc Natl Acad Sci U S A. 2018. PMID: 29941559 Free PMC article.
Using a reverse genetic approach, we here show that Atrimmer 2 (ATRM2), a DEDDy-type 3' to 5' exoribonuclease, acts in the degradation of unmethylated miRNAs and miRNA*s in Arabidopsis Loss-of-function mutations in ATRM2 partially suppress the morphological defects caused …
Using a reverse genetic approach, we here show that Atrimmer 2 (ATRM2), a DEDDy-type 3' to 5' exoribonuclease, acts in the degradatio …
Structure-function analysis of microRNA 3'-end trimming by Nibbler.
Xie W, Sowemimo I, Hayashi R, Wang J, Burkard TR, Brennecke J, Ameres SL, Patel DJ. Xie W, et al. Proc Natl Acad Sci U S A. 2020 Dec 1;117(48):30370-30379. doi: 10.1073/pnas.2018156117. Epub 2020 Nov 16. Proc Natl Acad Sci U S A. 2020. PMID: 33199607 Free PMC article.
The EXO domain of A. aegypti and Drosophila melanogaster Nbr adopt a mixed alpha/beta-scaffold with a deep pocket lined by a DEDDy catalytic cleavage motif. We demonstrate that Nbr's EXO domain exhibits Mn(2+)-dependent ssRNA-specific 3'-to-5' exoribonuclease activity. ...
The EXO domain of A. aegypti and Drosophila melanogaster Nbr adopt a mixed alpha/beta-scaffold with a deep pocket lined by a DEDDy ca …
NrnC, an RNase D-Like Protein From Agrobacterium, Is a Novel Octameric Nuclease That Specifically Degrades dsDNA but Leaves dsRNA Intact.
Yuan Z, Gao F, Yin K, Gu L. Yuan Z, et al. Front Microbiol. 2019 Jan 7;9:3230. doi: 10.3389/fmicb.2018.03230. eCollection 2018. Front Microbiol. 2019. PMID: 30666241 Free PMC article.
NrnC from Agrobacterium tumefaciens (At_NrnC, UniProt accession number A9CG28) is a nuclease containing a single DEDDy domain. Here, we determined the structures of both the apo and metal-ion-bound forms of At_NrnC. ...
NrnC from Agrobacterium tumefaciens (At_NrnC, UniProt accession number A9CG28) is a nuclease containing a single DEDDy domain. Here, …
LTR-Retrotransposons from Bdelloid Rotifers Capture Additional ORFs Shared between Highly Diverse Retroelement Types.
Rodriguez F, Kenefick AW, Arkhipova IR. Rodriguez F, et al. Viruses. 2017 Apr 11;9(4):78. doi: 10.3390/v9040078. Viruses. 2017. PMID: 28398238 Free PMC article.
Yet another ORF3 type appears in unrelated LTR-retrotransposon lineages, and displays strong homology to DEDDy-type exonucleases involved in 3'-end processing of RNA and single-stranded DNA. ...
Yet another ORF3 type appears in unrelated LTR-retrotransposon lineages, and displays strong homology to DEDDy-type exonucleases invo …
The RNAi Mechanism Regulates a New Exonuclease Gene Involved in the Virulence of Mucorales.
Pérez-Arques C, Navarro-Mendoza MI, Murcia L, Navarro E, Garre V, Nicolás FE. Pérez-Arques C, et al. Int J Mol Sci. 2021 Feb 25;22(5):2282. doi: 10.3390/ijms22052282. Int J Mol Sci. 2021. PMID: 33668930 Free PMC article.
Their functional analysis in murine virulence assays identified the gene wex1, a putative DEDDy exonuclease with RNase domains, as an essential factor for virulence. ...
Their functional analysis in murine virulence assays identified the gene wex1, a putative DEDDy exonuclease with RNase domains, as an …
The structure of human EXD2 reveals a chimeric 3' to 5' exonuclease domain that discriminates substrates via metal coordination.
Park J, Lee SY, Jeong H, Kang MG, Van Haute L, Minczuk M, Seo JK, Jun Y, Myung K, Rhee HW, Lee C. Park J, et al. Nucleic Acids Res. 2019 Jul 26;47(13):7078-7093. doi: 10.1093/nar/gkz454. Nucleic Acids Res. 2019. PMID: 31127291 Free PMC article.
EXD2 (3'-5' exonuclease domain-containing protein 2) is an essential protein with a conserved DEDDy superfamily 3'-5' exonuclease domain. Recent research suggests that EXD2 has two potential functions: as a component of the DNA double-strand break repair machinery and as a …
EXD2 (3'-5' exonuclease domain-containing protein 2) is an essential protein with a conserved DEDDy superfamily 3'-5' exonuclease dom …
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