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Year Number of Results
2002 1
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2008 5
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2010 4
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2012 2
2013 6
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2016 5
2017 2
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2020 10
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Page 1
CellML 2.0.
Clerx M, Cooling MT, Cooper J, Garny A, Moyle K, Nickerson DP, Nielsen PMF, Sorby H. Clerx M, et al. Among authors: nickerson dp. J Integr Bioinform. 2020 Jul 24;17(2-3):20200021. doi: 10.1515/jib-2020-0021. J Integr Bioinform. 2020. PMID: 32759406 Free PMC article.
Comment on IWGDF ulcer prevention guidelines.
Nickerson DS, Barrett SL. Nickerson DS, et al. Endocrinol Diabetes Metab. 2020 Jul 24;4(1):e00169. doi: 10.1002/edm2.169. eCollection 2021 Jan. Endocrinol Diabetes Metab. 2020. PMID: 33532611 Free PMC article.
Improving reproducibility in computational biology research.
Papin JA, Mac Gabhann F, Sauro HM, Nickerson D, Rampadarath A. Papin JA, et al. Among authors: nickerson d. PLoS Comput Biol. 2020 May 19;16(5):e1007881. doi: 10.1371/journal.pcbi.1007881. eCollection 2020 May. PLoS Comput Biol. 2020. PMID: 32427998 Free PMC article. No abstract available.
Community-driven roadmap for integrated disease maps.
Ostaszewski M, Gebel S, Kuperstein I, Mazein A, Zinovyev A, Dogrusoz U, Hasenauer J, Fleming RMT, Le Novère N, Gawron P, Ligon T, Niarakis A, Nickerson D, Weindl D, Balling R, Barillot E, Auffray C, Schneider R. Ostaszewski M, et al. Among authors: nickerson d. Brief Bioinform. 2019 Mar 25;20(2):659-670. doi: 10.1093/bib/bby024. Brief Bioinform. 2019. PMID: 29688273 Free PMC article. Review.
Harmonizing semantic annotations for computational models in biology.
Neal ML, König M, Nickerson D, Mısırlı G, Kalbasi R, Dräger A, Atalag K, Chelliah V, Cooling MT, Cook DL, Crook S, de Alba M, Friedman SH, Garny A, Gennari JH, Gleeson P, Golebiewski M, Hucka M, Juty N, Myers C, Olivier BG, Sauro HM, Scharm M, Snoep JL, Touré V, Wipat A, Wolkenhauer O, Waltemath D. Neal ML, et al. Among authors: nickerson d. Brief Bioinform. 2019 Mar 22;20(2):540-550. doi: 10.1093/bib/bby087. Brief Bioinform. 2019. PMID: 30462164 Free PMC article. Review.
Best Practices for Making Reproducible Biochemical Models.
Porubsky VL, Goldberg AP, Rampadarath AK, Nickerson DP, Karr JR, Sauro HM. Porubsky VL, et al. Among authors: nickerson dp. Cell Syst. 2020 Aug 26;11(2):109-120. doi: 10.1016/j.cels.2020.06.012. Cell Syst. 2020. PMID: 32853539 Free PMC article. Review.
OMEX metadata specification (version 1.2).
Gennari JH, König M, Misirli G, Neal ML, Nickerson DP, Waltemath D. Gennari JH, et al. Among authors: nickerson dp. J Integr Bioinform. 2021 Oct 20;18(3):20210020. doi: 10.1515/jib-2021-0020. J Integr Bioinform. 2021. PMID: 34668356 Free PMC article.
Specifications of standards in systems and synthetic biology: status and developments in 2022 and the COMBINE meeting 2022.
König M, Gleeson P, Golebiewski M, Gorochowski TE, Hucka M, Keating SM, Myers CJ, Nickerson DP, Sommer B, Waltemath D, Schreiber F. König M, et al. Among authors: nickerson dp. J Integr Bioinform. 2023 Mar 29;20(1):20230004. doi: 10.1515/jib-2023-0004. eCollection 2023 Mar 1. J Integr Bioinform. 2023. PMID: 36989443 Free PMC article.
SBML to bond graphs: From conversion to composition.
Shahidi N, Pan M, Tran K, Crampin EJ, Nickerson DP. Shahidi N, et al. Among authors: nickerson dp. Math Biosci. 2022 Oct;352:108901. doi: 10.1016/j.mbs.2022.108901. Epub 2022 Sep 9. Math Biosci. 2022. PMID: 36096376 Free article.
92 results