G-quadruplexes as sensing probes

Molecules. 2013 Nov 28;18(12):14760-79. doi: 10.3390/molecules181214760.

Abstract

Guanine-rich sequences of DNA are able to create tetrastranded structures known as G-quadruplexes; they are formed by the stacking of planar G-quartets composed of four guanines paired by Hoogsteen hydrogen bonding. G-quadruplexes act as ligands for metal ions and aptamers for various molecules. Interestingly, the G-quadruplexes form a complex with anionic porphyrin hemin and exhibit peroxidase-like activity. This review focuses on overview of sensing techniques based on G-quadruplex complexes with anionic porphyrins for detection of various analytes, including metal ions such as K+, Ca2+, Ag+, Hg2+, Cu2+, Pb2+, Sr2+, organic molecules, nucleic acids, and proteins. Principles of G-quadruplex-based detection methods involve DNA conformational change caused by the presence of analyte which leads to a decrease or an increase in peroxidase activity, fluorescence, or electrochemical signal of the used probe. The advantages of various detection techniques are also discussed.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Animals
  • Biosensing Techniques*
  • DNA / chemistry*
  • DNA, Catalytic / chemistry
  • G-Quadruplexes*
  • Gene Deletion
  • Humans
  • Ions / analysis
  • Ions / chemistry
  • Metals / analysis
  • Metals / chemistry
  • Nanoparticles / chemistry
  • Nucleic Acids / analysis
  • Nucleic Acids / chemistry
  • Organic Chemicals / analysis
  • Organic Chemicals / chemistry
  • Proteins / analysis
  • Proteins / chemistry
  • Tumor Suppressor Protein p53 / chemistry
  • Tumor Suppressor Protein p53 / genetics

Substances

  • DNA, Catalytic
  • Ions
  • Metals
  • Nucleic Acids
  • Organic Chemicals
  • Proteins
  • Tumor Suppressor Protein p53
  • DNA