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Page 1
Using ATAC-seq and RNA-seq to increase resolution in GRN connectivity.
Methods Cell Biol. 2019;151:115-126. doi: 10.1016/bs.mcb.2018.11.001. Epub 2018 Dec 24.
Methods Cell Biol. 2019.
PMID: 30948003
Review.
ATAC-Seq for Assaying Chromatin Accessibility Protocol Using Echinoderm Embryos.
Magri MS, Voronov D, Ranđelović J, Cuomo C, Gómez-Skarmeta JL, Arnone MI.
Magri MS, et al. Among authors: voronov d.
Methods Mol Biol. 2021;2219:253-265. doi: 10.1007/978-1-0716-0974-3_16.
Methods Mol Biol. 2021.
PMID: 33074546
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Active DNA demethylation of developmental cis-regulatory regions predates vertebrate origins.
Skvortsova K, Bertrand S, Voronov D, Duckett PE, Ross SE, Magri MS, Maeso I, Weatheritt RJ, Gómez Skarmeta JL, Arnone MI, Escriva H, Bogdanovic O.
Skvortsova K, et al. Among authors: voronov d.
Sci Adv. 2022 Dec 2;8(48):eabn2258. doi: 10.1126/sciadv.abn2258. Epub 2022 Dec 2.
Sci Adv. 2022.
PMID: 36459547
Free PMC article.
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An ancestral Wnt-Brachyury feedback loop in axial patterning and recruitment of mesoderm-determining target genes.
Schwaiger M, Andrikou C, Dnyansagar R, Murguia PF, Paganos P, Voronov D, Zimmermann B, Lebedeva T, Schmidt HA, Genikhovich G, Benvenuto G, Arnone MI, Technau U.
Schwaiger M, et al. Among authors: voronov d.
Nat Ecol Evol. 2022 Dec;6(12):1921-1939. doi: 10.1038/s41559-022-01905-w. Epub 2022 Nov 17.
Nat Ecol Evol. 2022.
PMID: 36396969
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Single-Cell Transcriptomic Analysis Reveals the Molecular Profile of Go-Opsin Photoreceptor Cells in Sea Urchin Larvae.
Cocurullo M, Paganos P, Annunziata R, Voronov D, Arnone MI.
Cocurullo M, et al. Among authors: voronov d.
Cells. 2023 Aug 23;12(17):2134. doi: 10.3390/cells12172134.
Cells. 2023.
PMID: 37681865
Free PMC article.
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A New Model Organism to Investigate Extraocular Photoreception: Opsin and Retinal Gene Expression in the Sea Urchin Paracentrotus lividus.
Paganos P, Ullrich-Lüter E, Caccavale F, Zakrzewski A, Voronov D, Fournon-Berodia I, Cocurullo M, Lüter C, Arnone MI.
Paganos P, et al. Among authors: voronov d.
Cells. 2022 Aug 24;11(17):2636. doi: 10.3390/cells11172636.
Cells. 2022.
PMID: 36078045
Free PMC article.
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Single-cell RNA sequencing of the Strongylocentrotus purpuratus larva reveals the blueprint of major cell types and nervous system of a non-chordate deuterostome.
Paganos P, Voronov D, Musser JM, Arendt D, Arnone MI.
Paganos P, et al. Among authors: voronov d.
Elife. 2021 Nov 25;10:e70416. doi: 10.7554/eLife.70416.
Elife. 2021.
PMID: 34821556
Free PMC article.
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