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Year Number of Results
2008 1
2011 2
2012 1
2013 1
2014 1
2015 3
2016 1
2017 4
2018 4
2019 6
2020 4
2021 4
2022 1
2023 2
2024 3

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Page 1
Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues.
Meehan CJ, Goig GA, Kohl TA, Verboven L, Dippenaar A, Ezewudo M, Farhat MR, Guthrie JL, Laukens K, Miotto P, Ofori-Anyinam B, Dreyer V, Supply P, Suresh A, Utpatel C, van Soolingen D, Zhou Y, Ashton PM, Brites D, Cabibbe AM, de Jong BC, de Vos M, Menardo F, Gagneux S, Gao Q, Heupink TH, Liu Q, Loiseau C, Rigouts L, Rodwell TC, Tagliani E, Walker TM, Warren RM, Zhao Y, Zignol M, Schito M, Gardy J, Cirillo DM, Niemann S, Comas I, Van Rie A. Meehan CJ, et al. Among authors: brites d. Nat Rev Microbiol. 2019 Sep;17(9):533-545. doi: 10.1038/s41579-019-0214-5. Nat Rev Microbiol. 2019. PMID: 31209399 Review.
An African origin for Mycobacterium bovis.
Loiseau C, Menardo F, Aseffa A, Hailu E, Gumi B, Ameni G, Berg S, Rigouts L, Robbe-Austerman S, Zinsstag J, Gagneux S, Brites D. Loiseau C, et al. Among authors: brites d. Evol Med Public Health. 2020 Jan 31;2020(1):49-59. doi: 10.1093/emph/eoaa005. eCollection 2020. Evol Med Public Health. 2020. PMID: 32211193 Free PMC article.
The relative transmission fitness of multidrug-resistant Mycobacterium tuberculosis in a drug resistance hotspot.
Loiseau C, Windels EM, Gygli SM, Jugheli L, Maghradze N, Brites D, Ross A, Goig G, Reinhard M, Borrell S, Trauner A, Dötsch A, Aspindzelashvili R, Denes R, Reither K, Beisel C, Tukvadze N, Avaliani Z, Stadler T, Gagneux S. Loiseau C, et al. Among authors: brites d. Nat Commun. 2023 Apr 8;14(1):1988. doi: 10.1038/s41467-023-37719-y. Nat Commun. 2023. PMID: 37031225 Free PMC article.
The molecular clock of Mycobacterium tuberculosis.
Menardo F, Duchêne S, Brites D, Gagneux S. Menardo F, et al. Among authors: brites d. PLoS Pathog. 2019 Sep 12;15(9):e1008067. doi: 10.1371/journal.ppat.1008067. eCollection 2019 Sep. PLoS Pathog. 2019. PMID: 31513651 Free PMC article.
Tuberculosis outbreak investigation using phylodynamic analysis.
Kühnert D, Coscolla M, Brites D, Stucki D, Metcalfe J, Fenner L, Gagneux S, Stadler T. Kühnert D, et al. Among authors: brites d. Epidemics. 2018 Dec;25:47-53. doi: 10.1016/j.epidem.2018.05.004. Epub 2018 May 22. Epidemics. 2018. PMID: 29880306 Free PMC article.
Back-to-Africa introductions of Mycobacterium tuberculosis as the main cause of tuberculosis in Dar es Salaam, Tanzania.
Zwyer M, Rutaihwa LK, Windels E, Hella J, Menardo F, Sasamalo M, Sommer G, Schmülling L, Borrell S, Reinhard M, Dötsch A, Hiza H, Stritt C, Sikalengo G, Fenner L, De Jong BC, Kato-Maeda M, Jugheli L, Ernst JD, Niemann S, Jeljeli L, Ballif M, Egger M, Rakotosamimanana N, Yeboah-Manu D, Asare P, Malla B, Dou HY, Zetola N, Wilkinson RJ, Cox H, Carter EJ, Gnokoro J, Yotebieng M, Gotuzzo E, Abimiku A, Avihingsanon A, Xu ZM, Fellay J, Portevin D, Reither K, Stadler T, Gagneux S, Brites D. Zwyer M, et al. Among authors: brites d. PLoS Pathog. 2023 Apr 4;19(4):e1010893. doi: 10.1371/journal.ppat.1010893. eCollection 2023 Apr. PLoS Pathog. 2023. PMID: 37014917 Free PMC article.
Using population-specific add-on polymorphisms to improve genotype imputation in underrepresented populations.
Xu ZM, Rüeger S, Zwyer M, Brites D, Hiza H, Reinhard M, Rutaihwa L, Borrell S, Isihaka F, Temba H, Maroa T, Naftari R, Hella J, Sasamalo M, Reither K, Portevin D, Gagneux S, Fellay J. Xu ZM, et al. Among authors: brites d. PLoS Comput Biol. 2022 Jan 13;18(1):e1009628. doi: 10.1371/journal.pcbi.1009628. eCollection 2022 Jan. PLoS Comput Biol. 2022. PMID: 35025869 Free PMC article.
37 results