Systems Biology Approach and Mathematical Modeling for Analyzing Phase-Space Switch During Epithelial-Mesenchymal Transition

Methods Mol Biol. 2018:1702:95-123. doi: 10.1007/978-1-4939-7456-6_7.

Abstract

In this report, we aim at presenting a viable strategy for the study of Epithelial-Mesenchymal Transition (EMT) and its opposite Mesenchymal-Epithelial Transition (MET) by means of a Systems Biology approach combined with a suitable Mathematical Modeling analysis. Precisely, it is shown how the presence of a metastable state, that is identified at a mesoscopic level of description, is crucial for making possible the appearance of a phase transition mechanism in the framework of fast-slow dynamics for Ordinary Differential Equations (ODEs).

Keywords: Epithelial-mesenchymal transition; Mathematical modeling; Mesoscopic description; Metastable states; Multiscale differential equations; Slow–fast dynamics; Stability analysis; Systems biology.

MeSH terms

  • Animals
  • Epithelial-Mesenchymal Transition*
  • Gene Expression Regulation
  • Humans
  • Models, Biological*
  • Systems Biology / methods*