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Evaluating the consistency of large-scale pharmacogenomic studies.
Rahman R, Dhruba SR, Matlock K, De-Niz C, Ghosh S, Pal R. Rahman R, et al. Among authors: de niz c. Brief Bioinform. 2019 Sep 27;20(5):1734-1753. doi: 10.1093/bib/bby046. Brief Bioinform. 2019. PMID: 31846027 Free PMC article. Review.
Investigation of model stacking for drug sensitivity prediction.
Matlock K, De Niz C, Rahman R, Ghosh S, Pal R. Matlock K, et al. Among authors: de niz c. BMC Bioinformatics. 2018 Mar 21;19(Suppl 3):71. doi: 10.1186/s12859-018-2060-2. BMC Bioinformatics. 2018. PMID: 29589559 Free PMC article.
Multi-PheWAS intersection approach to identify sex differences across comorbidities in 59 140 pediatric patients with autism spectrum disorder.
Gutiérrez-Sacristán A, Sáez C, De Niz C, Jalali N, DeSain TN, Kumar R, Zachariasse JM, Fox KP, Palmer N, Kohane I, Avillach P. Gutiérrez-Sacristán A, et al. Among authors: de niz c. J Am Med Inform Assoc. 2022 Jan 12;29(2):230-238. doi: 10.1093/jamia/ocab144. J Am Med Inform Assoc. 2022. PMID: 34405856 Free PMC article.
Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen.
Menden MP, Wang D, Mason MJ, Szalai B, Bulusu KC, Guan Y, Yu T, Kang J, Jeon M, Wolfinger R, Nguyen T, Zaslavskiy M; AstraZeneca-Sanger Drug Combination DREAM Consortium; Jang IS, Ghazoui Z, Ahsen ME, Vogel R, Neto EC, Norman T, Tang EKY, Garnett MJ, Veroli GYD, Fawell S, Stolovitzky G, Guinney J, Dry JR, Saez-Rodriguez J. Menden MP, et al. Nat Commun. 2019 Jun 17;10(1):2674. doi: 10.1038/s41467-019-09799-2. Nat Commun. 2019. PMID: 31209238 Free PMC article.