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UMGAP: the Unipept MetaGenomics Analysis Pipeline.
Van der Jeugt F, Maertens R, Steyaert A, Verschaffelt P, De Tender C, Dawyndt P, Mesuere B. Van der Jeugt F, et al. Among authors: mesuere b. BMC Genomics. 2022 Jun 10;23(1):433. doi: 10.1186/s12864-022-08542-4. BMC Genomics. 2022. PMID: 35689184 Free PMC article.
FragGeneScanRs: faster gene prediction for short reads.
Van der Jeugt F, Dawyndt P, Mesuere B. Van der Jeugt F, et al. Among authors: mesuere b. BMC Bioinformatics. 2022 May 28;23(1):198. doi: 10.1186/s12859-022-04736-5. BMC Bioinformatics. 2022. PMID: 35643462 Free PMC article.
Unipept 4.0: Functional Analysis of Metaproteome Data.
Gurdeep Singh R, Tanca A, Palomba A, Van der Jeugt F, Verschaffelt P, Uzzau S, Martens L, Dawyndt P, Mesuere B. Gurdeep Singh R, et al. Among authors: mesuere b. J Proteome Res. 2019 Feb 1;18(2):606-615. doi: 10.1021/acs.jproteome.8b00716. Epub 2018 Dec 4. J Proteome Res. 2019. PMID: 30465426
The Unipept metaproteomics analysis pipeline.
Mesuere B, Debyser G, Aerts M, Devreese B, Vandamme P, Dawyndt P. Mesuere B, et al. Proteomics. 2015 Apr;15(8):1437-42. doi: 10.1002/pmic.201400361. Epub 2015 Feb 11. Proteomics. 2015. PMID: 25477242
Unipept web services for metaproteomics analysis.
Mesuere B, Willems T, Van der Jeugt F, Devreese B, Vandamme P, Dawyndt P. Mesuere B, et al. Bioinformatics. 2016 Jun 1;32(11):1746-8. doi: 10.1093/bioinformatics/btw039. Epub 2016 Jan 27. Bioinformatics. 2016. PMID: 26819472
23 results