The Penta-EF-Hand ALG-2 Protein Interacts with the Cytosolic Domain of the SOCE Regulator SARAF and Interferes with Ubiquitination

Int J Mol Sci. 2020 Aug 31;21(17):6315. doi: 10.3390/ijms21176315.

Abstract

ALG-2 is a penta-EF-hand Ca2+-binding protein and interacts with a variety of proteins in mammalian cells. In order to find new ALG-2-binding partners, we searched a human protein database and retrieved sequences containing the previously identified ALG-2-binding motif type 2 (ABM-2). After selecting 12 high-scored sequences, we expressed partial or full-length GFP-fused proteins in HEK293 cells and performed a semi-quantitative in vitro binding assay. SARAF, a negative regulator of store-operated Ca2+ entry (SOCE), showed the strongest binding activity. Biochemical analysis of Strep-tagged and GFP-fused SARAF proteins revealed ubiquitination that proceeded during pulldown assays under certain buffer conditions. Overexpression of ALG-2 interfered with ubiquitination of wild-type SARAF but not ubiquitination of the F228S mutant that had impaired ALG-2-binding activity. The SARAF cytosolic domain (CytD) contains two PPXY motifs targeted by the WW domains of NEDD4 family E3 ubiquitin ligases. The PPXY motif proximal to the ABM-2 sequence was found to be more important for both in-cell ubiquitination and post-cell lysis ubiquitination. A ubiquitination-defective mutant of SARAF with Lys-to-Arg substitutions in the CytD showed a slower degradation rate by half-life analysis. ALG-2 promoted Ca2+-dependent CytD-to-CytD interactions of SARAF. The ALG-2 dimer may modulate the stability of SARAF by sterically blocking ubiquitination and by bridging SARAF molecules at the CytDs.

Keywords: HiBiT; NEDD4; PDCD6; SOCE; WW domain; adaptor; calcium-binding protein; protein-protein interaction; ubiquitin; ubiquitination.

MeSH terms

  • Apoptosis Regulatory Proteins / metabolism*
  • Calcium / metabolism*
  • Calcium Channels / metabolism*
  • Calcium-Binding Proteins / metabolism*
  • EF Hand Motifs*
  • HEK293 Cells
  • Humans
  • Intracellular Calcium-Sensing Proteins / metabolism*
  • Membrane Proteins / metabolism*
  • Protein Binding
  • Protein Interaction Domains and Motifs
  • Ubiquitination

Substances

  • Apoptosis Regulatory Proteins
  • Calcium Channels
  • Calcium-Binding Proteins
  • Intracellular Calcium-Sensing Proteins
  • Membrane Proteins
  • PDCD6 protein, human
  • SARAF protein, human
  • Calcium