Search Page
Save citations to file
Email citations
Send citations to clipboard
Add to Collections
Add to My Bibliography
Create a file for external citation management software
Your saved search
Your RSS Feed
Filters
Results by year
Table representation of search results timeline featuring number of search results per year.
Year | Number of Results |
---|---|
2019 | 2 |
2021 | 1 |
2023 | 1 |
2024 | 3 |
Search Results
7 results
Results by year
Filters applied: . Clear all
It looks like you are searching for an author.
Results are currently sorted by Best Match. To see the newest results first,
change the sort order to Most Recent.
Page 1
LegNet: a best-in-class deep learning model for short DNA regulatory regions.
Bioinformatics. 2023 Aug 1;39(8):btad457. doi: 10.1093/bioinformatics/btad457.
Bioinformatics. 2023.
PMID: 37490428
Free PMC article.
Ribonanza: deep learning of RNA structure through dual crowdsourcing.
He S, Huang R, Townley J, Kretsch RC, Karagianes TG, Cox DBT, Blair H, Penzar D, Vyaltsev V, Aristova E, Zinkevich A, Bakulin A, Sohn H, Krstevski D, Fukui T, Tatematsu F, Uchida Y, Jang D, Lee JS, Shieh R, Ma T, Martynov E, Shugaev MV, Bukhari HST, Fujikawa K, Onodera K, Henkel C, Ron S, Romano J, Nicol JJ, Nye GP, Wu Y, Choe C, Reade W, Participants E, Das R.
He S, et al. Among authors: zinkevich a.
bioRxiv [Preprint]. 2024 Feb 27:2024.02.24.581671. doi: 10.1101/2024.02.24.581671.
bioRxiv. 2024.
PMID: 38464325
Free PMC article.
Preprint.
Item in Clipboard
COVIDomic: A multi-modal cloud-based platform for identification of risk factors associated with COVID-19 severity.
Naumov V, Putin E, Pushkov S, Kozlova E, Romantsov K, Kalashnikov A, Galkin F, Tihonova N, Shneyderman A, Galkin E, Zinkevich A, Cope SM, Sethuraman R, Oprea TI, Pearson AT, Tay S, Agrawal N, Dubovenko A, Vanhaelen Q, Ozerov I, Aliper A, Izumchenko E, Zhavoronkov A.
Naumov V, et al. Among authors: zinkevich a.
PLoS Comput Biol. 2021 Jul 14;17(7):e1009183. doi: 10.1371/journal.pcbi.1009183. eCollection 2021 Jul.
PLoS Comput Biol. 2021.
PMID: 34260589
Free PMC article.
Item in Clipboard
Evaluation and optimization of sequence-based gene regulatory deep learning models.
Rafi AM, Nogina D, Penzar D, Lee D, Lee D, Kim N, Kim S, Kim D, Shin Y, Kwak IY, Meshcheryakov G, Lando A, Zinkevich A, Kim BC, Lee J, Kang T, Vaishnav ED, Yadollahpour P; Random Promoter DREAM Challenge Consortium; Kim S, Albrecht J, Regev A, Gong W, Kulakovskiy IV, Meyer P, de Boer C.
Rafi AM, et al. Among authors: zinkevich a.
bioRxiv [Preprint]. 2024 Feb 17:2023.04.26.538471. doi: 10.1101/2023.04.26.538471.
bioRxiv. 2024.
PMID: 38405704
Free PMC article.
Preprint.
Item in Clipboard
H3K4me3, H3K9ac, H3K27ac, H3K27me3 and H3K9me3 Histone Tags Suggest Distinct Regulatory Evolution of Open and Condensed Chromatin Landmarks.
Igolkina AA, Zinkevich A, Karandasheva KO, Popov AA, Selifanova MV, Nikolaeva D, Tkachev V, Penzar D, Nikitin DM, Buzdin A.
Igolkina AA, et al. Among authors: zinkevich a.
Cells. 2019 Sep 5;8(9):1034. doi: 10.3390/cells8091034.
Cells. 2019.
PMID: 31491936
Free PMC article.
Item in Clipboard
HOCOMOCO in 2024: a rebuild of the curated collection of binding models for human and mouse transcription factors.
Vorontsov IE, Eliseeva IA, Zinkevich A, Nikonov M, Abramov S, Boytsov A, Kamenets V, Kasianova A, Kolmykov S, Yevshin IS, Favorov A, Medvedeva YA, Jolma A, Kolpakov F, Makeev VJ, Kulakovskiy IV.
Vorontsov IE, et al. Among authors: zinkevich a.
Nucleic Acids Res. 2024 Jan 5;52(D1):D154-D163. doi: 10.1093/nar/gkad1077.
Nucleic Acids Res. 2024.
PMID: 37971293
Free PMC article.
Item in Clipboard
What Do Neighbors Tell About You: The Local Context of Cis-Regulatory Modules Complicates Prediction of Regulatory Variants.
Penzar DD, Zinkevich AO, Vorontsov IE, Sitnik VV, Favorov AV, Makeev VJ, Kulakovskiy IV.
Penzar DD, et al. Among authors: zinkevich ao.
Front Genet. 2019 Oct 31;10:1078. doi: 10.3389/fgene.2019.01078. eCollection 2019.
Front Genet. 2019.
PMID: 31737053
Free PMC article.
Item in Clipboard
Cite
Cite